Difference between revisions of "Very-long-chain-fatty-acids"

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(Created page with "Category:Gene == Gene Tiso_gene_3419 == * left end position: ** 81 * transcription direction: ** POSITIVE * right end position: ** 1840 * centisome position: ** 0.48424703...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15635 RXN-15635] == * direction: ** LEFT-TO-RIGHT * common name: ** ketopantoate_hydroxymethylt...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3419 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15635 RXN-15635] ==
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* left end position:
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* direction:
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** 81
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ketopantoate_hydroxymethyltransferase
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* right end position:
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* ec number:
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** 1840
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** [http://enzyme.expasy.org/EC/2.1.2.11 EC-2.1.2.11]
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* centisome position:
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** 0.48424703   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-15556]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[METHYLENETETRAHYDROMETHANOPTERIN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''=>''' 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[THMPT]][c]
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***ec-number
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* With common name(s):
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** 1 5,10-methylene-tetrahydromethanopterin[c] '''+''' 1 H2O[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''=>''' 1 2-dehydropantoate[c] '''+''' 1 tetrahydromethanopterin[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7511]]
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* [[Tiso_gene_14465]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14466]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-6654]], phosphopantothenate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6654 PWY-6654]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=81}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ketopantoate_hydroxymethyltransferase}}
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{{#set: right end position=1840}}
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{{#set: ec number=EC-2.1.2.11}}
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{{#set: centisome position=0.48424703    }}
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{{#set: gene associated=Tiso_gene_14465|Tiso_gene_14466}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: in pathway=PWY-6654}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:31, 18 March 2018

Reaction RXN-15635

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ketopantoate_hydroxymethyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6654, phosphopantothenate biosynthesis III: PWY-6654
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Very-long-chain-fatty-acids&oldid=25074"