Difference between revisions of "CPD-9247"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DOLICHOL-KINASE-RXN DOLICHOL-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://e...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * direction: ** REVERSIBLE * common name: ** aminotransferase ** aspartate_...") |
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Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == |
* direction: | * direction: | ||
− | ** | + | ** REVERSIBLE |
+ | * common name: | ||
+ | ** aminotransferase | ||
+ | ** aspartate_aminotransferase | ||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-CYSTEATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 2-oxoglutarate[c] '''+''' 1 L-cysteate[c] '''<=>''' 1 3-sulfopyruvate[c] '''+''' 1 L-glutamate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * [[Tiso_gene_6815]] |
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
+ | * [[Tiso_gene_13538]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_12889]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***AUTOMATED-NAME-MATCH | ||
+ | * [[Tiso_gene_17809]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***AUTOMATED-NAME-MATCH | ||
+ | * [[Tiso_gene_15680]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_17718]] | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
** [[pantograph]]-[[esiliculosus]] | ** [[pantograph]]-[[esiliculosus]] | ||
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638] |
− | ** '''1''' reactions found over ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
+ | * [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[orthology]]: | + | * Category: [[orthology]] |
− | ** [[pantograph]]: | + | ** Source: [[orthology-athaliana]] |
− | *** [[esiliculosus]] | + | *** Tool: [[pantograph]] |
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | |||
− | |||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433] |
− | {{#set: direction= | + | {{#set: direction=REVERSIBLE}} |
− | {{#set: ec number=EC-2. | + | {{#set: common name=aminotransferase}} |
− | {{#set: gene associated= | + | {{#set: common name=aspartate_aminotransferase}} |
− | {{#set: in pathway=PWY- | + | {{#set: ec number=EC-2.6.1.1}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: gene associated=Tiso_gene_6815|Tiso_gene_13538|Tiso_gene_12889|Tiso_gene_17809|Tiso_gene_15680|Tiso_gene_17718}} |
− | {{#set: reconstruction | + | {{#set: in pathway=PWY-6638|PWY-6643|PWY-6642}} |
− | {{#set: reconstruction | + | {{#set: reconstruction category=orthology|annotation}} |
+ | {{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 18:32, 18 March 2018
Contents
Reaction RXN-11737
- direction:
- REVERSIBLE
- common name:
- aminotransferase
- aspartate_aminotransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 2-KETOGLUTARATE[c] + 1 L-CYSTEATE[c] <=> 1 CPD-380[c] + 1 GLT[c]
- With common name(s):
- 1 2-oxoglutarate[c] + 1 L-cysteate[c] <=> 1 3-sulfopyruvate[c] + 1 L-glutamate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_6815
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-creinhardtii
- IN-SILICO_ANNOTATION
- Tiso_gene_13538
- Tiso_gene_12889
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- IN-SILICO_ANNOTATION
- Tiso_gene_17809
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- IN-SILICO_ANNOTATION
- Tiso_gene_15680
- Tiso_gene_17718
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-athaliana
- pantograph-esiliculosus
- EXPERIMENTAL_ANNOTATION
Pathways
- PWY-6638, sulfolactate degradation III: PWY-6638
- 1 reactions found over 3 reactions in the full pathway
- PWY-6643, coenzyme M biosynthesis II: PWY-6643
- 1 reactions found over 6 reactions in the full pathway
- PWY-6642, (R)-cysteate degradation: PWY-6642
- 1 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- LIGAND-RXN: