Difference between revisions of "TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_19642 == * left end position: ** 29 * transcription direction: ** POSITIVE * right end position: ** 2136 * centisome position: ** 1.3488371...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** 6-ph...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_19642 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] ==
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* left end position:
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* direction:
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** 29
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ORF
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* right end position:
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** 6-phosphogluconolactonase
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** 2136
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.1.1.31 EC-3.1.1.31]
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** 1.3488371   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-2961]][c] '''+''' 1 [[PROTON]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 6-phospho D-glucono-1,5-lactone[c] '''+''' 1 H2O[c] '''=>''' 1 D-gluconate 6-phosphate[c] '''+''' 1 H+[c]
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***ec-number
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_8585]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_10799]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20412]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15950]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_5901]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''14''' reactions found over '''18''' reactions in the full pathway
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* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and Entner-Doudoroff: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=29}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12556 12556]
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{{#set: right end position=2136}}
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* LIGAND-RXN:
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{{#set: centisome position=1.3488371    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02035 R02035]
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P63337 P63337]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=6-phosphogluconolactonase}}
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{{#set: ec number=EC-3.1.1.31}}
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{{#set: gene associated=Tiso_gene_8585|Tiso_gene_10799|Tiso_gene_20412|Tiso_gene_15950|Tiso_gene_5901}}
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{{#set: in pathway=P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:32, 18 March 2018

Reaction 6PGLUCONOLACT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • 6-phosphogluconolactonase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway
  • RUMP-PWY, formaldehyde oxidation I: RUMP-PWY
    • 3 reactions found over 6 reactions in the full pathway
  • OXIDATIVEPENT-PWY, pentose phosphate pathway (oxidative branch) I: OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • GLYCOLYSIS-E-D, superpathway of glycolysis and Entner-Doudoroff: GLYCOLYSIS-E-D
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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