Difference between revisions of "Tiso gene 16969"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CMP-KDO CMP-KDO] == * smiles: ** C(O)C(O)[CH]3(OC(OP(OCC2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))([O...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2881 RXN-2881] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CMP-KDO CMP-KDO] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2881 RXN-2881] ==
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* smiles:
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* direction:
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** C(O)C(O)[CH]3(OC(OP(OCC2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))([O-])=O)(C([O-])=O)CC(C3O)O)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=YWWJKULNWGRYAS-XKKDATLGSA-L
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* common name:
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** CMP-3-deoxy-β-D-manno-octulosonate
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* molecular weight:
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** 541.361   
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* Synonym(s):
 
* Synonym(s):
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** CMP-2-dehydro-3-deoxy-D-octonate
 
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** CMP-Kdo
 
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** CMP-β-Kdo
 
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** CMP-ketodeoxyoctonate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[KDOTRANS-RXN]]
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* With identifiers:
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* [[KDOTRANS2-RXN]]
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** 1 [[FORMALDEHYDE]][c] '''+''' 1 [[THF-GLU-N]][c] '''=>''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[WATER]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 formaldehyde[c] '''+''' 1 a tetrahydrofolate[c] '''=>''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[PWY-1622]], formaldehyde assimilation I (serine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622]
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** '''5''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91825729 91825729]
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** [http://www.genome.jp/dbget-bin/www_bget?R09093 R09093]
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* CHEBI:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=85987 85987]
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{{#set: in pathway=PWY-1622}}
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* BIGG : ckdo
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{{#set: reconstruction category=annotation}}
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* LIGAND-CPD:
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04121 C04121]
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=C(O)C(O)[CH]3(OC(OP(OCC2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))([O-])=O)(C([O-])=O)CC(C3O)O)}}
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{{#set: inchi key=InChIKey=YWWJKULNWGRYAS-XKKDATLGSA-L}}
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{{#set: common name=CMP-3-deoxy-β-D-manno-octulosonate}}
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{{#set: molecular weight=541.361    }}
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{{#set: common name=CMP-2-dehydro-3-deoxy-D-octonate|CMP-Kdo|CMP-β-Kdo|CMP-ketodeoxyoctonate}}
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{{#set: consumed by=KDOTRANS-RXN|KDOTRANS2-RXN}}
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Revision as of 18:33, 18 March 2018

Reaction RXN-2881

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-1622, formaldehyde assimilation I (serine pathway): PWY-1622
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links



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