Difference between revisions of "Tiso gene 5081"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPDEPHOS-RXN PEPDEPHOS-RXN] == * direction: ** REVERSIBLE * common name: ** pyruvate_kinase * ec n...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14803 RXN-14803] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...") |
||
Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14803 RXN-14803] == |
* direction: | * direction: | ||
− | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
− | ** | + | ** thiolase |
+ | ** acetyl-_c-acetyltransferase | ||
+ | ** 3-ketoacyl-_thiolase | ||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[CPD-15691]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15692]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 5-trans-3-oxo-dodecenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 3-trans-decenoyl-CoA[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * [[Tiso_gene_3855]] |
** IN-SILICO_ANNOTATION | ** IN-SILICO_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
− | * [[ | + | ** EXPERIMENTAL_ANNOTATION |
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_15327]] | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_3856]] | ||
** IN-SILICO_ANNOTATION | ** IN-SILICO_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
− | * [[ | + | * [[Tiso_gene_17451]] |
** IN-SILICO_ANNOTATION | ** IN-SILICO_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
** EXPERIMENTAL_ANNOTATION | ** EXPERIMENTAL_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
− | + | * [[Tiso_gene_10116]] | |
− | ** | + | ** IN-SILICO_ANNOTATION |
− | ** | + | ***EC-NUMBER |
− | * | + | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
** EXPERIMENTAL_ANNOTATION | ** EXPERIMENTAL_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
− | |||
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340] |
− | + | ** '''3''' reactions found over '''10''' reactions in the full pathway | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | ** ''' | + | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[ | + | * Category: [[annotation]] |
− | ** | + | ** Source: [[annotation-in-silico_annotation]] |
− | + | *** Tool: [[pathwaytools]] | |
− | *** [[ | + | ** Source: [[annotation-experimental_annotation]] |
− | ** | + | *** Tool: [[pathwaytools]] |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | *** [[ | + | |
== External links == | == External links == | ||
− | + | {{#set: direction=LEFT-TO-RIGHT}} | |
− | + | {{#set: common name=thiolase}} | |
− | + | {{#set: common name=acetyl-_c-acetyltransferase}} | |
− | + | {{#set: common name=3-ketoacyl-_thiolase}} | |
− | + | {{#set: ec number=EC-2.3.1.16}} | |
− | + | {{#set: gene associated=Tiso_gene_3855|Tiso_gene_15327|Tiso_gene_3856|Tiso_gene_17451|Tiso_gene_10116}} | |
− | + | {{#set: in pathway=PWY-7340}} | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | {{#set: | + | |
− | {{#set: common name= | + | |
− | {{#set: ec number=EC-2. | + | |
− | {{#set: gene associated= | + | |
− | {{#set: in pathway=PWY- | + | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
− |
Revision as of 18:34, 18 March 2018
Contents
Reaction RXN-14803
- direction:
- LEFT-TO-RIGHT
- common name:
- thiolase
- acetyl-_c-acetyltransferase
- 3-ketoacyl-_thiolase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-15691[c] + 1 CO-A[c] => 1 ACETYL-COA[c] + 1 CPD-15692[c]
- With common name(s):
- 1 5-trans-3-oxo-dodecenoyl-CoA[c] + 1 coenzyme A[c] => 1 acetyl-CoA[c] + 1 3-trans-decenoyl-CoA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_3855
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_15327
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- Tiso_gene_3856
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_17451
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_10116
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY-7340, 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): PWY-7340
- 3 reactions found over 10 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation