Difference between revisions of "Tiso gene 13864"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** selenophosphate_synthet...")
(Created page with "Category:Gene == Gene Tiso_gene_6339 == * left end position: ** 10787 * transcription direction: ** POSITIVE * right end position: ** 11619 * centisome position: ** 87.606...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] ==
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== Gene Tiso_gene_6339 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 10787
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* common name:
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* transcription direction:
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** selenophosphate_synthetase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.9.3 EC-2.7.9.3]
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** 11619
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* centisome position:
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** 87.6066   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ADENYLYLSULFATASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[SE-2]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[SEPO3]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[AMP]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 selenide[c] '''+''' 1 ATP[c] '''=>''' 1 selenophosphate[c] '''+''' 1 phosphate[c] '''+''' 1 AMP[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5669]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14608]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5668]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=10787}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=11619}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03595 R03595]
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{{#set: centisome position=87.6066    }}
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* UNIPROT:
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{{#set: reaction associated=ADENYLYLSULFATASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9PMF9 Q9PMF9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=selenophosphate_synthetase}}
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{{#set: ec number=EC-2.7.9.3}}
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{{#set: gene associated=Tiso_gene_5669|Tiso_gene_14608|Tiso_gene_5668}}
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{{#set: in pathway=PWY0-901|PWY-6281}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:35, 18 March 2018

Gene Tiso_gene_6339

  • left end position:
    • 10787
  • transcription direction:
    • POSITIVE
  • right end position:
    • 11619
  • centisome position:
    • 87.6066
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13864&oldid=25457"