Difference between revisions of "Tiso gene 4021"

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(Created page with "Category:Gene == Gene Tiso_gene_65 == * left end position: ** 41134 * transcription direction: ** POSITIVE * right end position: ** 42238 * centisome position: ** 78.07683...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a ** l...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_65 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] ==
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* left end position:
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* direction:
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** 41134
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** lipoate-protein_ligase_a
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* right end position:
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** lipoate-protein_ligase
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** 42238
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* centisome position:
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** 78.076836   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[F16ALDOLASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[ATP]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[LIPOYL-AMP]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 ATP[c] '''+''' 1 (R)-lipoate[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 lipoyl-adenylate[c]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[FPGPL]]
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* [[Tiso_gene_17216]]
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** [[pantograph]]-[[creinhardtii]]
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** IN-SILICO_ANNOTATION
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* [[RXN-8631]]
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***AUTOMATED-NAME-MATCH
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** in-silico_annotation
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* [[Tiso_gene_4494]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***AUTOMATED-NAME-MATCH
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***ec-number
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* [[Tiso_gene_17215]]
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** [[pantograph]]-[[esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[SEDOBISALDOL-RXN]]
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_8713]]
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** [[pantograph]]-[[athaliana]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[creinhardtii]]
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***AUTOMATED-NAME-MATCH
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== Pathways associated ==
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* [[Tiso_gene_4493]]
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* [[PWY-1042]]
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** IN-SILICO_ANNOTATION
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* [[P341-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[PWY66-373]]
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== Pathways ==
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* [[GLUCONEO-PWY]]
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* [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984]
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* [[GLYCOLYSIS]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[SUCSYN-PWY]]
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* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
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* [[PWY-7385]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[ANAGLYCOLYSIS-PWY]]
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== Reconstruction information  ==
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* [[CALVIN-PWY]]
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* Category: [[annotation]]
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* [[PWY0-1517]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-1861]]
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*** Tool: [[pathwaytools]]
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* [[PWY-6142]]
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* [[PWY-5484]]
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* [[P185-PWY]]
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* [[PWY66-399]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=41134}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12913 12913]
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{{#set: right end position=42238}}
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* LIGAND-RXN:
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{{#set: centisome position=78.076836    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770]
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{{#set: reaction associated=F16ALDOLASE-RXN|FPGPL|RXN-8631|SEDOBISALDOL-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-373|GLUCONEO-PWY|GLYCOLYSIS|SUCSYN-PWY|PWY-7385|ANAGLYCOLYSIS-PWY|CALVIN-PWY|PWY0-1517|PWY-1861|PWY-6142|PWY-5484|P185-PWY|PWY66-399}}
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{{#set: common name=lipoate-protein_ligase_a}}
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{{#set: common name=lipoate-protein_ligase}}
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{{#set: gene associated=Tiso_gene_17216|Tiso_gene_4494|Tiso_gene_17215|Tiso_gene_8713|Tiso_gene_4493}}
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{{#set: in pathway=PWY-6984|PWY0-522}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 19:36, 18 March 2018

Reaction RXN-8654

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipoate-protein_ligase_a
    • lipoate-protein_ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 (R)-lipoate[c] + 1 H+[c] => 1 diphosphate[c] + 1 lipoyl-adenylate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6984, lipoate salvage II: PWY-6984
    • 2 reactions found over 4 reactions in the full pathway
  • PWY0-522, lipoate salvage I: PWY0-522
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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