Difference between revisions of "Tiso gene 3425"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-METHYL-CROTONYL-COA 3-METHYL-CROTONYL-COA] == * smiles: ** CC(=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINE-NUCLEOSIDASE-RXN URIDINE-NUCLEOSIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-METHYL-CROTONYL-COA 3-METHYL-CROTONYL-COA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINE-NUCLEOSIDASE-RXN URIDINE-NUCLEOSIDASE-RXN] ==
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* smiles:
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* direction:
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** CC(=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=BXIPALATIYNHJN-ZMHDXICWSA-J
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* common name:
 
* common name:
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** 3-methylcrotonyl-CoA
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** inosine-uridine_preferring_nucleoside_hydrolase
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* molecular weight:
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* ec number:
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** 845.604   
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** [http://enzyme.expasy.org/EC/3.2.2.3 EC-3.2.2.3]
 
* Synonym(s):
 
* Synonym(s):
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** β-methylcrotonoyl-CoA
 
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** 3-methylbut-2-enoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[URIDINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-Ribofuranose]][c] '''+''' 1 [[URACIL]][c]
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* [[RXN0-2301]]
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* With common name(s):
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* [[RXN-11921]]
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** 1 uridine[c] '''+''' 1 H2O[c] '''=>''' 1 D-ribofuranose[c] '''+''' 1 uracil[c]
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* [[IVCDH]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[RXN-14264]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9396]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-6556]], pyrimidine ribonucleosides salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6556 PWY-6556]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?C03069 C03069]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15577 15577]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57344 57344]
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** [http://www.genome.jp/dbget-bin/www_bget?R01080 R01080]
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* METABOLIGHTS : MTBLC57344
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=inosine-uridine_preferring_nucleoside_hydrolase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266575 45266575]
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{{#set: ec number=EC-3.2.2.3}}
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* HMDB : HMDB01493
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{{#set: gene associated=Tiso_gene_9396}}
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{{#set: smiles=CC(=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C}}
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{{#set: in pathway=PWY-6556}}
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{{#set: inchi key=InChIKey=BXIPALATIYNHJN-ZMHDXICWSA-J}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: common name=3-methylcrotonyl-CoA}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii}}
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{{#set: molecular weight=845.604    }}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: common name=β-methylcrotonoyl-CoA|3-methylbut-2-enoyl-CoA}}
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{{#set: consumed by=METHYLCROTONYL-COA-CARBOXYLASE-RXN}}
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{{#set: produced by=RXN0-2301|RXN-11921|IVCDH}}
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{{#set: consumed or produced by=RXN-14264}}
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Revision as of 18:36, 18 March 2018

Reaction URIDINE-NUCLEOSIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • inosine-uridine_preferring_nucleoside_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 uridine[c] + 1 H2O[c] => 1 D-ribofuranose[c] + 1 uracil[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6556, pyrimidine ribonucleosides salvage II: PWY-6556
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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