Difference between revisions of "D-ALANINE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** long_chain_acyl-_...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-ALANINE D-ALANINE] == * smiles: ** CC([N+])C([O-])=O * inchi key: ** InChIKey=QNAYBMKLOCPYGJ-...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-ALANINE D-ALANINE] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC([N+])C([O-])=O
 +
* inchi key:
 +
** InChIKey=QNAYBMKLOCPYGJ-UWTATZPHSA-N
 
* common name:
 
* common name:
−
** long_chain_acyl-_synthetase
+
** D-alanine
−
** polyketide_synthase
+
* molecular weight:
−
** acyl-_synthetase
+
** 89.094   
−
** ORF
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[ATP]][c] '''+''' 1 [[LINOLENIC_ACID]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[LINOLENOYL-COA]][c]
+
* [[RXN-11351]]
−
* With common name(s):
+
* [[3.4.16.4-RXN]]
−
** 1 ATP[c] '''+''' 1 α-linolenate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 α-linolenoyl-CoA[c]
+
* [[RXN-16649]]
−
 
+
* [[RXN-16659]]
−
== Genes associated with this reaction  ==
+
* [[RXN-11065]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-11302]]
−
* [[Tiso_gene_7855]]
+
== Reaction(s) of unknown directionality ==
−
** IN-SILICO_ANNOTATION
+
* [[ALARACECAT-RXN]]
−
***EC-NUMBER
+
* [[D-ALANINE-AMINOTRANSFERASE-RXN]]
−
* [[Tiso_gene_136]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4191]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_348]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10876]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049]
+
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* CAS : 338-69-2
−
{{#set: common name=long_chain_acyl-_synthetase}}
+
* METABOLIGHTS : MTBLC57416
−
{{#set: common name=polyketide_synthase}}
+
* PUBCHEM:
−
{{#set: common name=acyl-_synthetase}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7311725 7311725]
−
{{#set: common name=ORF}}
+
* HMDB : HMDB01310
−
{{#set: ec number=EC-6.2.1.3}}
+
* LIGAND-CPD:
−
{{#set: gene associated=Tiso_gene_7855|Tiso_gene_136|Tiso_gene_135|Tiso_gene_4191|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_348|Tiso_gene_9394|Tiso_gene_10876}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C00133 C00133]
−
{{#set: in pathway=PWY-7049|PWY-7724}}
+
* CHEBI:
−
{{#set: reconstruction category=orthology}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57416 57416]
−
{{#set: reconstruction tool=pantograph}}
+
* BIGG : ala__D
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: smiles=CC([N+])C([O-])=O}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: inchi key=InChIKey=QNAYBMKLOCPYGJ-UWTATZPHSA-N}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: common name=D-alanine}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: molecular weight=89.094    }}
 +
{{#set: produced by=RXN-11351|3.4.16.4-RXN|RXN-16649|RXN-16659|RXN-11065|RXN-11302}}
 +
{{#set: reversible reaction associated=ALARACECAT-RXN|D-ALANINE-AMINOTRANSFERASE-RXN}}

Revision as of 19:36, 18 March 2018

Metabolite D-ALANINE

  • smiles:
    • CC([N+])C([O-])=O
  • inchi key:
    • InChIKey=QNAYBMKLOCPYGJ-UWTATZPHSA-N
  • common name:
    • D-alanine
  • molecular weight:
    • 89.094
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 338-69-2
  • METABOLIGHTS : MTBLC57416
  • PUBCHEM:
  • HMDB : HMDB01310
  • LIGAND-CPD:
  • CHEBI:
  • BIGG : ala__D
"CC([N+])C([O-])=O" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=D-ALANINE&oldid=25554"