Difference between revisions of "D-ALANINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** long_chain_acyl-_...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-ALANINE D-ALANINE] == * smiles: ** CC([N+])C([O-])=O * inchi key: ** InChIKey=QNAYBMKLOCPYGJ-...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-ALANINE D-ALANINE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC([N+])C([O-])=O
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* inchi key:
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** InChIKey=QNAYBMKLOCPYGJ-UWTATZPHSA-N
 
* common name:
 
* common name:
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** long_chain_acyl-_synthetase
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** D-alanine
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** polyketide_synthase
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* molecular weight:
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** acyl-_synthetase
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** 89.094   
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[LINOLENIC_ACID]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[LINOLENOYL-COA]][c]
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* [[RXN-11351]]
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* With common name(s):
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* [[3.4.16.4-RXN]]
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** 1 ATP[c] '''+''' 1 α-linolenate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 α-linolenoyl-CoA[c]
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* [[RXN-16649]]
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* [[RXN-16659]]
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== Genes associated with this reaction  ==
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* [[RXN-11065]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-11302]]
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* [[Tiso_gene_7855]]
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== Reaction(s) of unknown directionality ==
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** IN-SILICO_ANNOTATION
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* [[ALARACECAT-RXN]]
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***EC-NUMBER
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* [[D-ALANINE-AMINOTRANSFERASE-RXN]]
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 338-69-2
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{{#set: common name=long_chain_acyl-_synthetase}}
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* METABOLIGHTS : MTBLC57416
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{{#set: common name=polyketide_synthase}}
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* PUBCHEM:
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{{#set: common name=acyl-_synthetase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7311725 7311725]
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{{#set: common name=ORF}}
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* HMDB : HMDB01310
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{{#set: ec number=EC-6.2.1.3}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_7855|Tiso_gene_136|Tiso_gene_135|Tiso_gene_4191|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_348|Tiso_gene_9394|Tiso_gene_10876}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00133 C00133]
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{{#set: in pathway=PWY-7049|PWY-7724}}
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* CHEBI:
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{{#set: reconstruction category=orthology}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57416 57416]
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{{#set: reconstruction tool=pantograph}}
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* BIGG : ala__D
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{{#set: reconstruction source=esiliculosus}}
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{{#set: smiles=CC([N+])C([O-])=O}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=QNAYBMKLOCPYGJ-UWTATZPHSA-N}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=D-alanine}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: molecular weight=89.094    }}
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{{#set: produced by=RXN-11351|3.4.16.4-RXN|RXN-16649|RXN-16659|RXN-11065|RXN-11302}}
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{{#set: reversible reaction associated=ALARACECAT-RXN|D-ALANINE-AMINOTRANSFERASE-RXN}}

Revision as of 18:36, 18 March 2018

Metabolite D-ALANINE

  • smiles:
    • CC([N+])C([O-])=O
  • inchi key:
    • InChIKey=QNAYBMKLOCPYGJ-UWTATZPHSA-N
  • common name:
    • D-alanine
  • molecular weight:
    • 89.094
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 338-69-2
  • METABOLIGHTS : MTBLC57416
  • PUBCHEM:
  • HMDB : HMDB01310
  • LIGAND-CPD:
  • CHEBI:
  • BIGG : ala__D
"CC([N+])C([O-])=O" cannot be used as a page name in this wiki.



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