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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMDECARB-RXN DIAMINOPIMDECARB-RXN] == | + | == Gene Tiso_gene_412 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** diaminopimelate_decarboxylase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/4.1.1.20 EC-4.1.1.20]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * [[RXN-1224]] |
| − | ** 1 [[PROTON]][c] '''+''' 1 [[MESO-DIAMINOPIMELATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[LYS]][c]
| + | ** [[pantograph]]-[[esiliculosus]] |
| − | * With common name(s): | + | * [[RXN-15117]] |
| − | ** 1 H+[c] '''+''' 1 meso-diaminopimelate[c] '''=>''' 1 CO2[c] '''+''' 1 L-lysine[c] | + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_10737]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | * [[Tiso_gene_12041]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| | ** [[pantograph]]-[[athaliana]] | | ** [[pantograph]]-[[athaliana]] |
| − | ** [[pantograph]]-[[synechocystis]]
| + | == Pathways associated == |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | * [[PWY-7817]] |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | * [[PWYQT-4427]] |
| − | == Pathways == | + | |
| − | * [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097] | + | |
| − | ** '''7''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
| + | |
| − | ** '''6''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
| + | |
| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
| + | |
| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[creinhardtii]]
| + | |
| − | *** [[synechocystis]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | *** [[athaliana]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: reaction associated=RXN-1224|RXN-15117}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15101 15101]
| + | {{#set: pathway associated=PWY-7817|PWYQT-4427}} |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00451 R00451]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P19572 P19572]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A5M4 P0A5M4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P44316 P44316]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P56129 P56129]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O67262 O67262]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JWA6 Q9JWA6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CG26 Q9CG26]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P00861 P00861]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O27390 O27390]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PII5 Q9PII5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q58497 Q58497]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O29458 O29458]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41023 P41023]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P23630 P23630]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P09890 P09890]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q55484 Q55484]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O05321 O05321]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=diaminopimelate_decarboxylase}} | + | |
| − | {{#set: ec number=EC-4.1.1.20}}
| + | |
| − | {{#set: gene associated=Tiso_gene_10737|Tiso_gene_12041}}
| + | |
| − | {{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=in-silico_annotation}}
| + | |
