Difference between revisions of "2.4.1.229-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4191 RXNQT-4191] == * direction: ** LEFT-TO-RIGHT * common name: ** acid phosphatase * ec num...")
(Created page with "Category:Gene == Gene Tiso_gene_15327 == * left end position: ** 24 * transcription direction: ** POSITIVE * right end position: ** 1959 * centisome position: ** 0.4711425...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4191 RXNQT-4191] ==
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== Gene Tiso_gene_15327 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 24
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* common name:
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* transcription direction:
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** acid phosphatase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.1.3.100 EC-3.1.3.100]
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** 1959
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* centisome position:
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** 0.47114253   
 
* Synonym(s):
 
* Synonym(s):
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** acid phosphomonoesterase
 
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** phosphomonoesterase
 
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** glycerophosphatase
 
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** acid monophosphatase
 
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** acid phosphohydrolase
 
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** acid phosphomonoester hydrolase
 
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** uteroferrin
 
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** acid nucleoside diphosphate phosphatase
 
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** orthophosphoric-monoester phosphohydrolase (acid optimum)
 
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ACACT]]
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** 1 [[WATER]][c] '''+''' 1 [[THIAMINE-P]][c] '''=>''' 1 [[THIAMINE]][c] '''+''' 1 [[Pi]][c]
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** [[pantograph]]-[[creinhardtii]]
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* With common name(s):
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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** 1 H2O[c] '''+''' 1 thiamine phosphate[c] '''=>''' 1 thiamine[c] '''+''' 1 phosphate[c]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_17610]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_4497]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17625]]
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** [[pantograph]]-[[creinhardtii]]
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* [[KETOACYLCOATHIOL-RXN]]
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** experimental_annotation
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***ec-number
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* [[METHYLACETOACETYLCOATHIOL-RXN]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_11838]]
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* [[RXN-10699]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-10700]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-10701]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-11246]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-12561]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15256]]
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* [[RXN-12565]]
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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** [[pantograph]]-[[creinhardtii]]
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* [[PWY-6907]], thiamine diphosphate biosynthesis III (Staphylococcus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6907 PWY-6907]
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* [[RXN-12710]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** experimental_annotation
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* [[PWY-6908]], thiamine diphosphate biosynthesis IV (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6908 PWY-6908]
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***ec-number
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[RXN-13617]]
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* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
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** experimental_annotation
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** '''5''' reactions found over '''7''' reactions in the full pathway
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***ec-number
−
== Reconstruction information  ==
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* [[RXN-14268]]
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* [[orthology]]:
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** experimental_annotation
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** [[pantograph]]:
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***ec-number
−
*** [[esiliculosus]]
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* [[RXN-14274]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-14277]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-14394]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-14774]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-14788]]
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-14793]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-14799]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-14803]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-16137]]
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** experimental_annotation
 +
***ec-number
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* [[RXN-17116]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-17778]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-17782]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-17787]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-17791]]
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** experimental_annotation
 +
***ec-number
 +
* [[RXN-17795]]
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** experimental_annotation
 +
***ec-number
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* [[RXN-17799]]
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** experimental_annotation
 +
***ec-number
 +
== Pathways associated ==
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* [[P162-PWY]]
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* [[PWY-5177]]
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* [[PWY-6583]]
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* [[P163-PWY]]
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* [[PWY-6883]]
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* [[PWY-5676]]
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* [[PWY-5136]]
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* [[PWY-6588]]
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* [[PWY-7779]]
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* [[PWY-7778]]
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* [[PWY-7288]]
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* [[PWY1-3]]
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* [[PWY-7340]]
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* [[PWY-7337]]
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[PWY66-391]]
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* [[PWY-5789]]
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* [[FAO-PWY]]
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* [[PWY-6876]]
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* [[CENTFERM-PWY]]
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* [[PWY-6945]]
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* [[PWY-7391]]
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* [[PWY-5741]]
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* [[PWY-5109]]
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* [[PWY-6174]]
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* [[ACETOACETATE-DEG-PWY]]
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* [[PWY-6948]]
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* [[PWY-7726]]
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* [[PWY66-367]]
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* [[PWY-6435]]
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* [[ILEUDEG-PWY]]
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* [[PWY-7216]]
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* [[PWY-922]]
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* [[PWY-7606]]
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* [[PWY-7338]]
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* [[PWY66-368]]
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* [[PWY-7339]]
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* [[PWY-6946]]
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* [[PWY-735]]
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* [[PWY-7401]]
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* [[PWY-6863]]
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* [[PWY-7524]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
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{{#set: left end position=24}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02135 R02135]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1959}}
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{{#set: common name=acid phosphatase}}
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{{#set: centisome position=0.47114253    }}
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{{#set: ec number=EC-3.1.3.100}}
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{{#set: reaction associated=ACACT|ACETYL-COA-ACETYLTRANSFER-RXN|KETOACYLCOATHIOL-RXN|METHYLACETOACETYLCOATHIOL-RXN|RXN-10699|RXN-10700|RXN-10701|RXN-11246|RXN-12561|RXN-12565|RXN-12710|RXN-13617|RXN-14268|RXN-14274|RXN-14277|RXN-14394|RXN-14774|RXN-14788|RXN-14793|RXN-14799|RXN-14803|RXN-16137|RXN-17116|RXN-17778|RXN-17782|RXN-17787|RXN-17791|RXN-17795|RXN-17799}}
−
{{#set: common name=acid phosphomonoesterase|phosphomonoesterase|glycerophosphatase|acid monophosphatase|acid phosphohydrolase|acid phosphomonoester hydrolase|uteroferrin|acid nucleoside diphosphate phosphatase|orthophosphoric-monoester phosphohydrolase (acid optimum)}}
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{{#set: pathway associated=P162-PWY|PWY-5177|PWY-6583|P163-PWY|PWY-6883|PWY-5676|PWY-5136|PWY-6588|PWY-7779|PWY-7778|PWY-7288|PWY1-3|PWY-7340|PWY-7337|PWY-7094|PWY-7654|PWY66-391|PWY-5789|FAO-PWY|PWY-6876|CENTFERM-PWY|PWY-6945|PWY-7391|PWY-5741|PWY-5109|PWY-6174|ACETOACETATE-DEG-PWY|PWY-6948|PWY-7726|PWY66-367|PWY-6435|ILEUDEG-PWY|PWY-7216|PWY-922|PWY-7606|PWY-7338|PWY66-368|PWY-7339|PWY-6946|PWY-735|PWY-7401|PWY-6863|PWY-7524}}
−
{{#set: gene associated=Tiso_gene_17610|Tiso_gene_4497|Tiso_gene_17625|Tiso_gene_11838|Tiso_gene_15256}}
+
−
{{#set: in pathway=PWY-6907|PWY-6908|PWY-7356}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=esiliculosus}}
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Revision as of 18:37, 18 March 2018

Gene Tiso_gene_15327

  • left end position:
    • 24
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1959
  • centisome position:
    • 0.47114253
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=2.4.1.229-RXN&oldid=25725"