Difference between revisions of "Tiso gene 5035"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427] == * direction: ** LEFT-TO-RIGHT * common name: ** ca2+-activated_spot-like_pr...")
(Created page with "Category:Gene == Gene Tiso_gene_14191 == * left end position: ** 116 * transcription direction: ** POSITIVE * right end position: ** 5247 * centisome position: ** 2.002071...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427] ==
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== Gene Tiso_gene_14191 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 116
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* common name:
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* transcription direction:
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** ca2+-activated_spot-like_protein
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.1.7.2 EC-3.1.7.2]
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** 5247
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* centisome position:
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** 2.0020711   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ADENOSYLHOMOCYSTEINASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[GDP-TP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[GTP]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 pppGpp[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 GTP[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_6799]]
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** [[pantograph]]-[[esiliculosus]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[creinhardtii]]
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***EC-NUMBER
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* [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]]
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== Pathways ==
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** [[pantograph]]-[[esiliculosus]]
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* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
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== Pathways associated ==
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[METHIONINE-DEG1-PWY]]
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== Reconstruction information  ==
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* [[PWY-I9]]
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* [[annotation]]:
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* [[PWY-5041]]
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** [[pathwaytools]]:
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* [[PWY-6154]]
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*** [[in-silico_annotation]]
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* [[PWY-6151]]
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* [[PWY-6153]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=116}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33055 33055]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5247}}
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{{#set: common name=ca2+-activated_spot-like_protein}}
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{{#set: centisome position=2.0020711    }}
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{{#set: ec number=EC-3.1.7.2}}
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{{#set: reaction associated=ADENOSYLHOMOCYSTEINASE-RXN|ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN}}
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{{#set: gene associated=Tiso_gene_6799}}
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{{#set: pathway associated=METHIONINE-DEG1-PWY|PWY-I9|PWY-5041|PWY-6154|PWY-6151|PWY-6153}}
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{{#set: in pathway=PPGPPMET-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:38, 18 March 2018

Gene Tiso_gene_14191

  • left end position:
    • 116
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5247
  • centisome position:
    • 2.0020711
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5035&oldid=25835"