Difference between revisions of "GTP-CYCLOHYDRO-II-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-22 RXN-22] == * direction: ** LEFT-TO-RIGHT * common name: ** argininosuccinate_lyase * ec numb...")
(Created page with "Category:Gene == Gene Tiso_gene_1007 == * left end position: ** 3470 * transcription direction: ** POSITIVE * right end position: ** 6190 * centisome position: ** 11.50912...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-22 RXN-22] ==
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== Gene Tiso_gene_1007 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3470
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* common name:
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* transcription direction:
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** argininosuccinate_lyase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.3.2.1 EC-4.3.2.1]
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** 6190
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* centisome position:
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** 11.509120   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PRPPAMIDOTRANS-RXN]]
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** 1 [[CANAVANINOSUCCINATE]][c] '''=>''' 1 [[FUM]][c] '''+''' 1 [[CANAVANINE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 canavaninosuccinate[c] '''=>''' 1 fumarate[c] '''+''' 1 L-canavanine[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6121]]
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* [[Tiso_gene_2485]]
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* [[PWY-6122]]
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** IN-SILICO_ANNOTATION
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* [[PWY-7282]]
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***EC-NUMBER
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* [[PWY-6277]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-5]], canavanine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5 PWY-5]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=3470}}
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{{#set: common name=argininosuccinate_lyase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-4.3.2.1}}
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{{#set: right end position=6190}}
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{{#set: gene associated=Tiso_gene_2485}}
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{{#set: centisome position=11.509120    }}
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{{#set: in pathway=PWY-5}}
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{{#set: reaction associated=PRPPAMIDOTRANS-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-6121|PWY-6122|PWY-7282|PWY-6277}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:39, 18 March 2018

Gene Tiso_gene_1007

  • left end position:
    • 3470
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6190
  • centisome position:
    • 11.509120
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GTP-CYCLOHYDRO-II-RXN&oldid=25978"