Difference between revisions of "Tiso gene 11842"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=LAUROYLCOA-CPD LAUROYLCOA-CPD] == * smiles: ** CCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=LAUROYLCOA-CPD LAUROYLCOA-CPD] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.1.1.104 EC-2.1.1.104]
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** InChIKey=YMCXGHLSVALICC-GMHMEAMDSA-J
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* common name:
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** lauroyl-CoA
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* molecular weight:
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** 945.808   
 
* Synonym(s):
 
* Synonym(s):
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** dodecanoyl-CoA (n-C12:0CoA)
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** lauroyl coenzyme A
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** dodecanoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-9627]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CAFFEOYL-COA]][c] '''=>''' 1 [[FERULOYL-COA]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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* [[ACOA120or]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 trans-caffeoyl-CoA[c] '''=>''' 1 feruloyl-CoA[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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* [[RXN-16393]]
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* [[RXN-14268]]
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== Genes associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[ACACT6]]
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* [[Tiso_gene_10561]]
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* [[RXN-14262]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14561]]
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** [[pantograph]]-[[athaliana]]
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== Pathways  ==
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* [[PWY-6792]], scopoletin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6792 PWY-6792]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''9''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-5710]], capsaicin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5710 PWY-5710]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6039]], chlorogenic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6039 PWY-6039]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
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** '''7''' reactions found over '''15''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 6244-92-4
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16925 16925]
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* METABOLIGHTS : MTBLC57375
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R01942 R01942]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25113193 25113193]
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* UNIPROT:
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* HMDB : HMDB03571
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** [http://www.uniprot.org/uniprot/P28034 P28034]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/O65307 O65307]
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** [http://www.genome.jp/dbget-bin/www_bget?C01832 C01832]
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** [http://www.uniprot.org/uniprot/Q42945 Q42945]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/O24144 O24144]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57375 57375]
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** [http://www.uniprot.org/uniprot/O24149 O24149]
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* BIGG : ddcacoa
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** [http://www.uniprot.org/uniprot/O24150 O24150]
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{{#set: smiles=CCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.uniprot.org/uniprot/O24151 O24151]
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{{#set: inchi key=InChIKey=YMCXGHLSVALICC-GMHMEAMDSA-J}}
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** [http://www.uniprot.org/uniprot/O04899 O04899]
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{{#set: common name=lauroyl-CoA}}
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** [http://www.uniprot.org/uniprot/O49499 O49499]
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{{#set: molecular weight=945.808    }}
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** [http://www.uniprot.org/uniprot/Q9SVI7 Q9SVI7]
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{{#set: common name=dodecanoyl-CoA (n-C12:0CoA)|lauroyl coenzyme A|dodecanoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q40313 Q40313]
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{{#set: consumed by=RXN-9627|ACOA120or}}
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** [http://www.uniprot.org/uniprot/Q43095 Q43095]
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{{#set: produced by=RXN-16393|RXN-14268}}
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** [http://www.uniprot.org/uniprot/O04854 O04854]
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{{#set: reversible reaction associated=ACACT6|RXN-14262}}
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** [http://www.uniprot.org/uniprot/O65162 O65162]
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** [http://www.uniprot.org/uniprot/O65362 O65362]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.1.1.104}}
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{{#set: gene associated=Tiso_gene_10561|Tiso_gene_14561}}
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{{#set: in pathway=PWY-6792|PWY-1121|PWY-5710|PWY-7498|PWY-6039|PWY-7398|PWY-361}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Revision as of 18:42, 18 March 2018

Metabolite LAUROYLCOA-CPD

  • smiles:
    • CCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • inchi key:
    • InChIKey=YMCXGHLSVALICC-GMHMEAMDSA-J
  • common name:
    • lauroyl-CoA
  • molecular weight:
    • 945.808
  • Synonym(s):
    • dodecanoyl-CoA (n-C12:0CoA)
    • lauroyl coenzyme A
    • dodecanoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 6244-92-4
  • METABOLIGHTS : MTBLC57375
  • PUBCHEM:
  • HMDB : HMDB03571
  • LIGAND-CPD:
  • CHEBI:
  • BIGG : ddcacoa
"CCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.




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