Difference between revisions of "ARGSUCCINSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-947 RXN0-947] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase * ec n...")
(Created page with "Category:Gene == Gene Tiso_gene_5939 == * left end position: ** 9686 * transcription direction: ** NEGATIVE * right end position: ** 12287 * centisome position: ** 76.0342...")
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[[Category:Reaction]]
+
[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-947 RXN0-947] ==
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== Gene Tiso_gene_5939 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
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** 9686
−
* common name:
+
* transcription direction:
−
** lipoate-protein_ligase
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** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.3.1.181 EC-2.3.1.181]
+
** 12287
 +
* centisome position:
 +
** 76.034225   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
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== Reactions associated ==
−
* With identifiers:
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* [[2.3.1.41-RXN]]
−
** 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[Lipoyl-Protein-L-Lysine]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Octanoylated-domains]][c]
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** in-silico_annotation
−
* With common name(s):
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***ec-number
−
** 1 an octanoyl-[acp][c] '''+''' 1 a [lipoyl-carrier protein]-L-lysine[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 H+[c] '''+''' 1 a [lipoyl-carrier protein] N6-octanoyl-L-lysine[c]
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** experimental_annotation
−
 
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***ec-number
−
== Genes associated with this reaction  ==
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* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
−
* [[Tiso_gene_4494]]
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***ec-number
−
** IN-SILICO_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***ec-number
−
* [[Tiso_gene_4493]]
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* [[3-OXOACYL-ACP-SYNTH-RXN]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
−
***EC-NUMBER
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***ec-number
−
== Pathways  ==
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** experimental_annotation
−
* [[PWY0-501]], lipoate biosynthesis and incorporation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-501 PWY0-501]
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***ec-number
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[RXN-10059]]
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== Reconstruction information  ==
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** in-silico_annotation
−
* [[annotation]]:
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***ec-number
−
** [[pathwaytools]]:
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** experimental_annotation
−
*** [[in-silico_annotation]]
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***ec-number
 +
* [[RXN-10654]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-10658]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-11474]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-11479]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-16615]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-16621]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-16625]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-16629]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9516]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9523]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9527]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9531]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9535]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9539]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9632]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9648]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9650]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9651]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9652]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9653]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-9654]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN0-2141]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN1G-368]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN1G-445]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN1G-460]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN1G-499]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN3O-1803]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
== Pathways associated ==
 +
* [[PWY-6113]]
 +
* [[FASYN-ELONG-PWY]]
 +
* [[PWY-6519]]
 +
* [[PWY-7388]]
 +
* [[PWY-5994]]
 +
* [[PWY-5971]]
 +
* [[PWY-6282]]
 +
* [[PWY-5965]]
 +
* [[PWY-5989]]
 +
* [[PWY-5966]]
 +
* [[PWYG-321]]
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* [[FASYN-INITIAL-PWY]]
 +
* [[PWY-7663]]
 +
* [[PWY-7664]]
 +
* [[PWY3O-355]]
 +
* [[PWY0-862]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=9686}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07766 R07766]
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=12287}}
−
{{#set: common name=lipoate-protein_ligase}}
+
{{#set: centisome position=76.034225    }}
−
{{#set: ec number=EC-2.3.1.181}}
+
{{#set: reaction associated=2.3.1.41-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|RXN-10059|RXN-10654|RXN-10658|RXN-11474|RXN-11479|RXN-16615|RXN-16621|RXN-16625|RXN-16629|RXN-9516|RXN-9523|RXN-9527|RXN-9531|RXN-9535|RXN-9539|RXN-9632|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN0-2141|RXN1G-368|RXN1G-445|RXN1G-460|RXN1G-499|RXN3O-1803}}
−
{{#set: gene associated=Tiso_gene_4494|Tiso_gene_4493}}
+
{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-7388|PWY-5994|PWY-5971|PWY-6282|PWY-5965|PWY-5989|PWY-5966|PWYG-321|FASYN-INITIAL-PWY|PWY-7663|PWY-7664|PWY3O-355|PWY0-862}}
−
{{#set: in pathway=PWY0-501}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:43, 18 March 2018

Gene Tiso_gene_5939

  • left end position:
    • 9686
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 12287
  • centisome position:
    • 76.034225
  • Synonym(s):

Reactions associated

  • 2.3.1.41-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • 3-OXOACYL-ACP-SYNTH-BASE-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • 3-OXOACYL-ACP-SYNTH-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-10059
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-10654
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-10658
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-11474
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-11479
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-16615
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-16621
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-16625
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-16629
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9516
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9523
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9527
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9531
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9535
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9539
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9632
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9648
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9650
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9651
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9652
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9653
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-9654
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN0-2141
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN1G-368
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN1G-445
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN1G-460
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN1G-499
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN3O-1803
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ARGSUCCINSYN-RXN&oldid=26380"