Difference between revisions of "HSO3"

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(Created page with "Category:Gene == Gene Tiso_gene_5939 == * left end position: ** 9686 * transcription direction: ** NEGATIVE * right end position: ** 12287 * centisome position: ** 76.0342...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-947 RXN0-947] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase * ec n...")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_5939 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-947 RXN0-947] ==
* left end position:
+
* direction:
** 9686
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** NEGATIVE
+
** lipoate-protein_ligase
* right end position:
+
* ec number:
** 12287
+
** [http://enzyme.expasy.org/EC/2.3.1.181 EC-2.3.1.181]
* centisome position:
+
** 76.034225   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* [[2.3.1.41-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[Lipoyl-Protein-L-Lysine]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''=>''' 1 [[Octanoylated-domains]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[PROTON]][c]
***ec-number
+
* With common name(s):
** experimental_annotation
+
** 1 a [lipoyl-carrier protein]-L-lysine[c] '''+''' 1 an octanoyl-[acp][c] '''=>''' 1 a [lipoyl-carrier protein] N6-octanoyl-L-lysine[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 H+[c]
***ec-number
+
 
* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
+
== Genes associated with this reaction  ==
** in-silico_annotation
+
Genes have been associated with this reaction based on different elements listed below.
***ec-number
+
* [[Tiso_gene_4493]]
** experimental_annotation
+
** IN-SILICO_ANNOTATION
***ec-number
+
***EC-NUMBER
* [[3-OXOACYL-ACP-SYNTH-RXN]]
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* [[Tiso_gene_4494]]
** in-silico_annotation
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** IN-SILICO_ANNOTATION
***ec-number
+
***EC-NUMBER
** experimental_annotation
+
== Pathways  ==
***ec-number
+
* [[PWY0-501]], lipoate biosynthesis and incorporation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-501 PWY0-501]
* [[RXN-10059]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
** in-silico_annotation
+
== Reconstruction information  ==
***ec-number
+
* Category: [[annotation]]
** experimental_annotation
+
** Source: [[annotation-in-silico_annotation]]
***ec-number
+
*** Tool: [[pathwaytools]]
* [[RXN-10654]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-10658]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-11474]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-11479]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-16615]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-16621]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-16625]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-16629]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9516]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9523]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9527]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9531]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9535]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9539]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9632]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9648]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9650]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9651]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9652]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9653]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-9654]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN0-2141]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN1G-368]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN1G-445]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN1G-460]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN1G-499]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN3O-1803]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
== Pathways associated ==
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* [[PWY-6113]]
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* [[FASYN-ELONG-PWY]]
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* [[PWY-6519]]
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* [[PWY-7388]]
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* [[PWY-5994]]
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* [[PWY-5971]]
+
* [[PWY-6282]]
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* [[PWY-5965]]
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* [[PWY-5989]]
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* [[PWY-5966]]
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* [[PWYG-321]]
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* [[FASYN-INITIAL-PWY]]
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* [[PWY-7663]]
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* [[PWY-7664]]
+
* [[PWY3O-355]]
+
* [[PWY0-862]]
+
 
== External links  ==
 
== External links  ==
{{#set: left end position=9686}}
+
* LIGAND-RXN:
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07766 R07766]
{{#set: right end position=12287}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=76.034225    }}
+
{{#set: common name=lipoate-protein_ligase}}
{{#set: reaction associated=2.3.1.41-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|RXN-10059|RXN-10654|RXN-10658|RXN-11474|RXN-11479|RXN-16615|RXN-16621|RXN-16625|RXN-16629|RXN-9516|RXN-9523|RXN-9527|RXN-9531|RXN-9535|RXN-9539|RXN-9632|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN0-2141|RXN1G-368|RXN1G-445|RXN1G-460|RXN1G-499|RXN3O-1803}}
+
{{#set: ec number=EC-2.3.1.181}}
{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-7388|PWY-5994|PWY-5971|PWY-6282|PWY-5965|PWY-5989|PWY-5966|PWYG-321|FASYN-INITIAL-PWY|PWY-7663|PWY-7664|PWY3O-355|PWY0-862}}
+
{{#set: gene associated=Tiso_gene_4493|Tiso_gene_4494}}
 +
{{#set: in pathway=PWY0-501}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:43, 18 March 2018

Reaction RXN0-947

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipoate-protein_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-501, lipoate biosynthesis and incorporation I: PWY0-501
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links