Difference between revisions of "DELTA-TOCOPHEROL"

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(Created page with "Category:Gene == Gene Tiso_gene_17043 == * left end position: ** 2279 * transcription direction: ** POSITIVE * right end position: ** 3383 * centisome position: ** 57.5505...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS2-RXN KDOTRANS2-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_17043 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS2-RXN KDOTRANS2-RXN] ==
* left end position:
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* direction:
** 2279
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** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/2.4.99.13 EC-2.4.99.13]
* right end position:
+
** 3383
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* centisome position:
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** 57.550507   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[ACSERLY-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[KDO-LIPID-IVA]][c] '''+''' 1 [[CMP-KDO]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CMP]][c] '''+''' 1 [[KDO2-LIPID-IVA]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 α-Kdo-(2→6)-lipid IVA[c] '''+''' 1 CMP-3-deoxy-β-D-manno-octulosonate[c] '''=>''' 1 H+[c] '''+''' 1 CMP[c] '''+''' 1 α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA[c]
***ec-number
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* [[RXN-12726]]
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== Genes associated with this reaction  ==
** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
***ec-number
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* [[Tiso_gene_14463]]
** experimental_annotation
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** [[pantograph]]-[[athaliana]]
***ec-number
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== Pathways  ==
* [[SULFOCYS-RXN]]
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* [[KDOSYN-PWY]], Kdo transfer to lipid IVA I: [http://metacyc.org/META/NEW-IMAGE?object=KDOSYN-PWY KDOSYN-PWY]
** in-silico_annotation
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** '''2''' reactions found over '''2''' reactions in the full pathway
***ec-number
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== Reconstruction information  ==
** experimental_annotation
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* Category: [[orthology]]
***ec-number
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** Source: [[orthology-athaliana]]
== Pathways associated ==
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*** Tool: [[pantograph]]
* [[CYSTSYN-PWY]]
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* [[PWY-6936]]
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== External links  ==
 
== External links  ==
{{#set: left end position=2279}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28062 28062]
{{#set: right end position=3383}}
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* LIGAND-RXN:
{{#set: centisome position=57.550507    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05074 R05074]
{{#set: reaction associated=ACSERLY-RXN|RXN-12726|SULFOCYS-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: pathway associated=CYSTSYN-PWY|PWY-6936}}
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{{#set: ec number=EC-2.4.99.13}}
 +
{{#set: gene associated=Tiso_gene_14463}}
 +
{{#set: in pathway=KDOSYN-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:44, 18 March 2018

Reaction KDOTRANS2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-Kdo-(2→6)-lipid IVA[c] + 1 CMP-3-deoxy-β-D-manno-octulosonate[c] => 1 H+[c] + 1 CMP[c] + 1 α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • KDOSYN-PWY, Kdo transfer to lipid IVA I: KDOSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links