Difference between revisions of "RXN-14276"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPMANDEHYDRA-RXN GDPMANDEHYDRA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GDP-mannose...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI 2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI] == * smiles: **...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPMANDEHYDRA-RXN GDPMANDEHYDRA-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI 2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(=O)([O-])C(=C(C([O-])=O)N)C=C[CH]=O
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* inchi key:
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** InChIKey=KACPVQQHDVBVFC-PMRVSPHWSA-L
 
* common name:
 
* common name:
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** GDP-mannose 4,6-dehydratase
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** aminocarboxymuconate semialdehyde
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/4.2.1.47 EC-4.2.1.47]
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** 183.12   
 
* Synonym(s):
 
* Synonym(s):
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** 2-amino-3-carboxymuconate-6-semialdehyde
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** 2-amino-3-carboxymuconate semialdehyde
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** 2-amino-3-(3-oxoprop-1-en-1-yl)-but-2-enedioate
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** (E,E)-2-amino-3-(3-oxoprop-1-enyl)but-2-enedioate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-5721]]
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** 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[1.13.11.6-RXN]]
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** 1 GDP-α-D-mannose[c] '''=>''' 1 H2O[c] '''+''' 1 GDP-4-dehydro-α-D-rhamnose[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13092]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_13093]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[GDPRHAMSYN-PWY]], GDP-D-rhamnose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=GDPRHAMSYN-PWY GDPRHAMSYN-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7573]], GDP-mycosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7573 PWY-7573]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5740]], GDP-L-colitose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5740 PWY-5740]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-66]], GDP-L-fucose biosynthesis I (from GDP-D-mannose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-66 PWY-66]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5738]], GDP-6-deoxy-D-talose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5738 PWY-5738]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5739]], GDP-D-perosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5739 PWY-5739]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23820 23820]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=9543319 9543319]
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* LIGAND-RXN:
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* HMDB : HMDB01330
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** [http://www.genome.jp/dbget-bin/www_bget?R00888 R00888]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C04409 C04409]
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** [http://www.uniprot.org/uniprot/Q84439 Q84439]
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* CHEMSPIDER:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.chemspider.com/Chemical-Structure.7822292.html 7822292]
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{{#set: common name=GDP-mannose 4,6-dehydratase}}
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* CHEBI:
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{{#set: ec number=EC-4.2.1.47}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=994 994]
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{{#set: gene associated=Tiso_gene_13092|Tiso_gene_13093}}
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* METABOLIGHTS : MTBLC994
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{{#set: in pathway=GDPRHAMSYN-PWY|PWY-7573|PWY-5740|PWY-66|PWY-5738|PWY-5739}}
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{{#set: smiles=C(=O)([O-])C(=C(C([O-])=O)N)C=C[CH]=O}}
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{{#set: reconstruction category=orthology}}
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{{#set: inchi key=InChIKey=KACPVQQHDVBVFC-PMRVSPHWSA-L}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: common name=aminocarboxymuconate semialdehyde}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: molecular weight=183.12    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=2-amino-3-carboxymuconate-6-semialdehyde|2-amino-3-carboxymuconate semialdehyde|2-amino-3-(3-oxoprop-1-en-1-yl)-but-2-enedioate|(E,E)-2-amino-3-(3-oxoprop-1-enyl)but-2-enedioate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: consumed by=RXN-5721}}
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{{#set: reconstruction source=experimental_annotation}}
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{{#set: produced by=1.13.11.6-RXN}}

Revision as of 19:44, 18 March 2018

Metabolite 2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI

  • smiles:
    • C(=O)([O-])C(=C(C([O-])=O)N)C=C[CH]=O
  • inchi key:
    • InChIKey=KACPVQQHDVBVFC-PMRVSPHWSA-L
  • common name:
    • aminocarboxymuconate semialdehyde
  • molecular weight:
    • 183.12
  • Synonym(s):
    • 2-amino-3-carboxymuconate-6-semialdehyde
    • 2-amino-3-carboxymuconate semialdehyde
    • 2-amino-3-(3-oxoprop-1-en-1-yl)-but-2-enedioate
    • (E,E)-2-amino-3-(3-oxoprop-1-enyl)but-2-enedioate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(=O)([O-])C(=C(C([O-])=O)N)C=C[CH]=O" cannot be used as a page name in this wiki.




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