Difference between revisions of "Tiso gene 17309"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7913 RXN-7913] == * direction: ** LEFT-TO-RIGHT * common name: ** cytidylate_kinase ** ump-cmp_...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7913 RXN-7913] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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* common name:
 
−
** cytidylate_kinase
 
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** ump-cmp_kinase
 
 
* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.25 EC-2.7.4.25]
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14]
+
−
** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[DCMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DCDP]][c]
+
** 1 [[CPD-17386]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-17387]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 dCMP[c] '''=>''' 1 ADP[c] '''+''' 1 dCDP[c]
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** 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_14116]]
 
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** [[pantograph]]-[[esiliculosus]]
 
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* [[Tiso_gene_2386]]
 
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** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
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* [[Tiso_gene_19734]]
 
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** IN-SILICO_ANNOTATION
 
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***EC-NUMBER
 
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** [[pantograph]]-[[athaliana]]
 
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** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_9739]]
 
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** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
+
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''14''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
*** [[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[annotation]]:
+
*** Tool: [[pathwaytools]]
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25094 25094]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01665 R01665]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=cytidylate_kinase}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: common name=ump-cmp_kinase}}
+
{{#set: in pathway=PWY-7606}}
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{{#set: ec number=EC-2.7.4.25}}
+
−
{{#set: ec number=EC-2.7.4.14}}
+
−
{{#set: ec number=EC-2.7.4.13}}
+
−
{{#set: gene associated=Tiso_gene_14116|Tiso_gene_2386|Tiso_gene_19734|Tiso_gene_9739}}
+
−
{{#set: in pathway=PWY-7197}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus|athaliana}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 18:45, 18 March 2018

Reaction RXN-16135

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] + 1 H2O[c] => 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17309&oldid=26554"