Difference between revisions of "RXN-7974"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9516 RXN-9516] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-hexanoyl-[acyl-carrier...")
(Created page with "Category:Gene == Gene Tiso_gene_14829 == * left end position: ** 473 * transcription direction: ** POSITIVE * right end position: ** 3041 * centisome position: ** 8.752776...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9516 RXN-9516] ==
+
== Gene Tiso_gene_14829 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 473
−
* common name:
+
* transcription direction:
−
** 3-oxo-hexanoyl-[acyl-carrier protein] synthase
+
** POSITIVE
−
** 3-oxoacyl-synthase
+
* right end position:
−
* ec number:
+
** 3041
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
* centisome position:
 +
** 8.752776   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[DIHYDRODIPICSYN-RXN]]
−
** 1 [[Butanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-hexanoyl-ACPs]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***automated-name-match
−
** 1 a butyryl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-hexanoyl-[acp][c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_19302]]
+
−
** [[pantograph]]-[[synechocystis]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_15991]]
+
* [[R02292]]
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14485]]
+
 
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[synechocystis]]
−
** [[pantograph]]-[[esiliculosus]]
+
== Pathways associated ==
−
* [[Tiso_gene_5939]]
+
* [[PWY-5097]]
−
** IN-SILICO_ANNOTATION
+
* [[PWY-2942]]
−
***EC-NUMBER
+
* [[DAPLYSINESYN-PWY]]
−
** EXPERIMENTAL_ANNOTATION
+
* [[PWY-2941]]
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
−
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[synechocystis]]
+
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=473}}
−
{{#set: common name=3-oxo-hexanoyl-[acyl-carrier protein] synthase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=3-oxoacyl-synthase}}
+
{{#set: right end position=3041}}
−
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: centisome position=8.752776    }}
−
{{#set: gene associated=Tiso_gene_19302|Tiso_gene_15991|Tiso_gene_14485|Tiso_gene_5939}}
+
{{#set: reaction associated=DIHYDRODIPICSYN-RXN|R02292}}
−
{{#set: in pathway=PWY-5971|PWY-7388}}
+
{{#set: pathway associated=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:45, 18 March 2018

Gene Tiso_gene_14829

  • left end position:
    • 473
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3041
  • centisome position:
    • 8.752776
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7974&oldid=26640"