Difference between revisions of "3OH-4P-OH-ALPHA-KETOBUTYRATE"

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(Created page with "Category:Gene == Gene Tiso_gene_3065 == * left end position: ** 3122 * transcription direction: ** POSITIVE * right end position: ** 7036 * centisome position: ** 17.73561...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7676 RXN-7676] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyllide-a monooxygenas...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3065 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7676 RXN-7676] ==
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* left end position:
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* direction:
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** 3122
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** chlorophyllide-a monooxygenase
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* right end position:
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** rieske_2fe-2sdomainiss
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** 7036
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** tic55_component_of_chloroplast_import_machinery
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* centisome position:
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** isp_domain-containing_protein
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** 17.735615   
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* Synonym(s):
 
* Synonym(s):
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** chlorophyllide a oxygenase
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** chlorophyll-b synthase
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** CAO
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-11856]]
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* With identifiers:
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** experimental_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-7015]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 H+[c] '''+''' 1 chlorophyllide a[c] '''+''' 1 NADPH[c] '''+''' 1 oxygen[c] '''=>''' 1 NADP+[c] '''+''' 1 H2O[c] '''+''' 1 71-hydroxychlorophyllide a[c]
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* [[PWY-6829]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_152]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4002]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13817]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12611]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8091]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3122}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22676 22676]
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{{#set: right end position=7036}}
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* LIGAND-RXN:
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{{#set: centisome position=17.735615    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R08203 R08203]
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{{#set: reaction associated=RXN-11856}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-6829}}
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{{#set: common name=chlorophyllide-a monooxygenase}}
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{{#set: common name=rieske_2fe-2sdomainiss}}
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{{#set: common name=tic55_component_of_chloroplast_import_machinery}}
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{{#set: common name=isp_domain-containing_protein}}
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{{#set: common name=chlorophyllide a oxygenase|chlorophyll-b synthase|CAO}}
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{{#set: gene associated=Tiso_gene_152|Tiso_gene_4002|Tiso_gene_13817|Tiso_gene_12611|Tiso_gene_8091}}
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{{#set: in pathway=PWY-5068}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:45, 18 March 2018

Reaction RXN-7676

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chlorophyllide-a monooxygenase
    • rieske_2fe-2sdomainiss
    • tic55_component_of_chloroplast_import_machinery
    • isp_domain-containing_protein
  • Synonym(s):
    • chlorophyllide a oxygenase
    • chlorophyll-b synthase
    • CAO

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5068, chlorophyll cycle: PWY-5068
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links






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