Difference between revisions of "Tiso gene 18780"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOLO-ACP-SYNTH-RXN HOLO-ACP-SYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4_-phosph...")
(Created page with "Category:Gene == Gene Tiso_gene_4650 == * left end position: ** 82 * transcription direction: ** NEGATIVE * right end position: ** 3399 * centisome position: ** 0.56145155...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOLO-ACP-SYNTH-RXN HOLO-ACP-SYNTH-RXN] ==
+
== Gene Tiso_gene_4650 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 82
−
* common name:
+
* transcription direction:
−
** 4_-phosphopantetheinyl_transferase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.7.8.7 EC-2.7.8.7]
+
** 3399
 +
* centisome position:
 +
** 0.56145155   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[3.1.1.64-RXN]]
−
** 1 [[apo-ACP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[3-5-ADP]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 an apo-[acyl-carrier protein][c] '''+''' 1 coenzyme A[c] '''=>''' 1 H+[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 adenosine 3',5'-bisphosphate[c]
+
** [[pantograph]]-[[esiliculosus]]
−
 
+
* [[ACETYLCHOLINESTERASE-RXN]]
−
== Genes associated with this reaction  ==
+
** in-silico_annotation
−
Genes have been associated with this reaction based on different elements listed below.
+
***ec-number
−
* [[Tiso_gene_12201]]
+
* [[ACYLCARNITINE-HYDROLASE-RXN]]
−
** IN-SILICO_ANNOTATION
+
** in-silico_annotation
−
***AUTOMATED-NAME-MATCH
+
***ec-number
 +
* [[CARBOXYLESTERASE-RXN]]
 +
** in-silico_annotation
 +
***ec-number
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 +
** in-silico_annotation
 +
***ec-number
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-10711]]
 +
** in-silico_annotation
 +
***ec-number
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-10767]]
 +
** in-silico_annotation
 +
***ec-number
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-12252]]
 +
** in-silico_annotation
 +
***ec-number
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-12575]]
 +
** in-silico_annotation
 +
***ec-number
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXNQT-4366]]
 +
** in-silico_annotation
 +
***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_14278]]
+
== Pathways associated ==
−
** IN-SILICO_ANNOTATION
+
* [[PWY-6857]]
−
***EC-NUMBER
+
* [[PWY-6303]]
−
== Pathways ==
+
−
* [[PWY-6012-1]], acyl carrier protein activation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6012-1 PWY-6012-1]
+
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
−
* [[PWY-6012]], acyl carrier protein metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6012 PWY-6012]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=82}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01625 R01625]
+
{{#set: transcription direction=NEGATIVE}}
−
* UNIPROT:
+
{{#set: right end position=3399}}
−
** [http://www.uniprot.org/uniprot/Q9PMP8 Q9PMP8]
+
{{#set: centisome position=0.56145155    }}
−
** [http://www.uniprot.org/uniprot/P24224 P24224]
+
{{#set: reaction associated=3.1.1.64-RXN|ACETYLCHOLINESTERASE-RXN|ACYLCARNITINE-HYDROLASE-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
−
** [http://www.uniprot.org/uniprot/O84102 O84102]
+
{{#set: pathway associated=PWY-6857|PWY-6303}}
−
** [http://www.uniprot.org/uniprot/Q9RQW2 Q9RQW2]
+
−
** [http://www.uniprot.org/uniprot/O83800 O83800]
+
−
** [http://www.uniprot.org/uniprot/Q9ZCX5 Q9ZCX5]
+
−
** [http://www.uniprot.org/uniprot/Q9ZL36 Q9ZL36]
+
−
** [http://www.uniprot.org/uniprot/O25488 O25488]
+
−
** [http://www.uniprot.org/uniprot/P96618 P96618]
+
−
** [http://www.uniprot.org/uniprot/O66995 O66995]
+
−
** [http://www.uniprot.org/uniprot/P0A4W8 P0A4W8]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=4_-phosphopantetheinyl_transferase}}
+
−
{{#set: ec number=EC-2.7.8.7}}
+
−
{{#set: gene associated=Tiso_gene_12201|Tiso_gene_14278}}
+
−
{{#set: in pathway=PWY-6012-1|PWY-6012}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:46, 18 March 2018

Gene Tiso_gene_4650

  • left end position:
    • 82
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3399
  • centisome position:
    • 0.56145155
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18780&oldid=26732"