Difference between revisions of "PWY-5384"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HIS-tRNAs HIS-tRNAs] == * common name: ** a tRNAhis * Synonym(s): ** TRNA(HIS) == Reaction(s)...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPKIN-RXN GDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** nucleoside_diphosp...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPKIN-RXN GDPKIN-RXN] == |
+ | * direction: | ||
+ | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** ORF |
+ | ** nucleoside_diphosphate_kinase | ||
+ | ** adenylate_kinase_domain-containing_protein_1 | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6] | ||
* Synonym(s): | * Synonym(s): | ||
− | |||
− | == Reaction(s) | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | == | + | ** 1 [[ATP]][c] '''+''' 1 [[GDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GTP]][c] |
− | == | + | * With common name(s): |
+ | ** 1 ATP[c] '''+''' 1 GDP[c] '''=>''' 1 ADP[c] '''+''' 1 GTP[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_16529]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
+ | * [[Tiso_gene_17272]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_18224]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_9290]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_195]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_17271]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | == Pathways == | ||
+ | * [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY] | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * [[orthology]]: | ||
+ | ** [[pantograph]]: | ||
+ | *** [[creinhardtii]] | ||
+ | *** [[synechocystis]] | ||
+ | *** [[esiliculosus]] | ||
+ | *** [[athaliana]] | ||
+ | * [[manual]]: | ||
+ | ** [[primary_network]] | ||
+ | * [[annotation]]: | ||
+ | ** [[pathwaytools]]: | ||
+ | *** [[experimental_annotation]] | ||
+ | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
− | {{#set: common name= | + | * RHEA: |
− | {{#set: common name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27686 27686] |
− | {{#set: | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00330 R00330] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=ORF}} | ||
+ | {{#set: common name=nucleoside_diphosphate_kinase}} | ||
+ | {{#set: common name=adenylate_kinase_domain-containing_protein_1}} | ||
+ | {{#set: ec number=EC-2.7.4.6}} | ||
+ | {{#set: gene associated=Tiso_gene_16529|Tiso_gene_17272|Tiso_gene_18224|Tiso_gene_9290|Tiso_gene_195|Tiso_gene_17271}} | ||
+ | {{#set: in pathway=PWY-7221|PPGPPMET-PWY}} | ||
+ | {{#set: reconstruction category=orthology}} | ||
+ | {{#set: reconstruction tool=pantograph}} | ||
+ | {{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}} | ||
+ | {{#set: reconstruction category=manual}} | ||
+ | {{#set: reconstruction source=primary_network}} | ||
+ | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} | ||
+ | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}} |
Revision as of 15:58, 10 January 2018
Contents
Reaction GDPKIN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- ORF
- nucleoside_diphosphate_kinase
- adenylate_kinase_domain-containing_protein_1
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 ATP[c] + 1 GDP[c] => 1 ADP[c] + 1 GTP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_16529
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-athaliana
- pantograph-synechocystis
- pantograph-esiliculosus
- pantograph-creinhardtii
- IN-SILICO_ANNOTATION
- Tiso_gene_17272
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_18224
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_9290
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_195
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_17271
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
- 4 reactions found over 4 reactions in the full pathway
- PPGPPMET-PWY, ppGpp biosynthesis: PPGPPMET-PWY
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
External links