Difference between revisions of "RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-35 CPD-35] == * smiles: ** CC(=O)NCCCC(=O)[O-] * inchi key: ** InChIKey=UZTFMUBKZQVKLK-UHFF...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14201 RXN-14201] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-35 CPD-35] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14201 RXN-14201] ==
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* smiles:
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* direction:
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** CC(=O)NCCCC(=O)[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=UZTFMUBKZQVKLK-UHFFFAOYSA-M
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* common name:
 
* common name:
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** 4-acetamidobutanoate
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** ORF
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* molecular weight:
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* ec number:
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** 144.15   
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** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
 
* Synonym(s):
 
* Synonym(s):
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** N-acetyl-4-aminobutyrate
 
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** N-acetyl-γ-aminobutyrate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-37]]
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** 1 [[GTP]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 2 [[Pi]][c] '''+''' 2 [[PROTON]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 GTP[c] '''+''' 2 H2O[c] '''=>''' 1 GMP[c] '''+''' 2 phosphate[c] '''+''' 2 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_20236]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12899]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6991994 6991994]
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{{#set: common name=ORF}}
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* HMDB : HMDB03681
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{{#set: ec number=EC-3.6.1.5}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
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** [http://www.genome.jp/dbget-bin/www_bget?C02946 C02946]
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{{#set: in pathway=}}
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* CHEMSPIDER:
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{{#set: reconstruction category=orthology|manual|annotation}}
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** [http://www.chemspider.com/Chemical-Structure.5360158.html 5360158]
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{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
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* CHEBI:
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=11951 11951]
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* METABOLIGHTS : MTBLC11951
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{{#set: smiles=CC(=O)NCCCC(=O)[O-]}}
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{{#set: inchi key=InChIKey=UZTFMUBKZQVKLK-UHFFFAOYSA-M}}
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{{#set: common name=4-acetamidobutanoate}}
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{{#set: molecular weight=144.15    }}
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{{#set: common name=N-acetyl-4-aminobutyrate|N-acetyl-γ-aminobutyrate}}
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{{#set: produced by=RXN-37}}
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Revision as of 18:47, 18 March 2018

Reaction RXN-14201

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GTP[c] + 2 H2O[c] => 1 GMP[c] + 2 phosphate[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

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