Difference between revisions of "RXN-12171"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FE+3 FE+3] == * smiles: ** [Fe+++] * inchi key: ** InChIKey=VTLYFUHAOXGGBS-UHFFFAOYSA-N * commo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.8-RXN 1.8.4.8-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FE+3 FE+3] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.8-RXN 1.8.4.8-RXN] ==
−
* smiles:
+
* direction:
−
** [Fe+++]
+
** REVERSIBLE
−
* inchi key:
+
* ec number:
−
** InChIKey=VTLYFUHAOXGGBS-UHFFFAOYSA-N
+
** [http://enzyme.expasy.org/EC/1.8.4.8 EC-1.8.4.8]
−
* common name:
+
−
** Fe3+
+
−
* molecular weight:
+
−
** 55.847   
+
 
* Synonym(s):
 
* Synonym(s):
−
** ferric iron
 
−
** Fe+++
 
−
** Fe+3
 
−
** ferric ion
 
−
** fe(iii)
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[TransportSeed_FE+3]]
+
* With identifiers:
−
* [[RXN-14387]]
+
** 1 [[SO3]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[3-5-ADP]][c] '''<=>''' 1 [[Red-Thioredoxin]][c] '''+''' 1 [[PAPS]][c]
−
== Reaction(s) known to produce the compound ==
+
* With common name(s):
−
* [[TransportSeed_FE+3]]
+
** 1 sulfite[c] '''+''' 1 an oxidized thioredoxin[c] '''+''' 2 H+[c] '''+''' 1 adenosine 3',5'-bisphosphate[c] '''<=>''' 1 a reduced thioredoxin[c] '''+''' 1 3'-phosphoadenylyl-sulfate[c]
−
* [[RXN-12540]]
+
 
−
* [[RXN-12541]]
+
== Genes associated with this reaction  ==
−
== Reaction(s) of unknown directionality ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[ExchangeSeed_FE+3]]
+
* [[Tiso_gene_15770]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
* [[SO4ASSIM-PWY]], sulfate reduction I (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=SO4ASSIM-PWY SO4ASSIM-PWY]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* METABOLIGHTS : MTBLC29034
+
* RHEA:
−
* PUBCHEM:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11724 11724]
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=29936 29936]
+
* LIGAND-RXN:
−
* HMDB : HMDB12943
+
** [http://www.genome.jp/dbget-bin/www_bget?R02021 R02021]
−
* LIGAND-CPD:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?C14819 C14819]
+
** [http://www.uniprot.org/uniprot/P17853 P17853]
−
* CHEMSPIDER:
+
** [http://www.uniprot.org/uniprot/P94498 P94498]
−
** [http://www.chemspider.com/Chemical-Structure.27815.html 27815]
+
** [http://www.uniprot.org/uniprot/P17854 P17854]
−
* CHEBI:
+
** [http://www.uniprot.org/uniprot/Q55309 Q55309]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29034 29034]
+
** [http://www.uniprot.org/uniprot/P52672 P52672]
−
* BIGG : fe3
+
** [http://www.uniprot.org/uniprot/P18408 P18408]
−
{{#set: smiles=[Fe+++]}}
+
** [http://www.uniprot.org/uniprot/Q10270 Q10270]
−
{{#set: inchi key=InChIKey=VTLYFUHAOXGGBS-UHFFFAOYSA-N}}
+
** [http://www.uniprot.org/uniprot/P72794 P72794]
−
{{#set: common name=Fe3+}}
+
** [http://www.uniprot.org/uniprot/Q39619 Q39619]
−
{{#set: molecular weight=55.847    }}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=ferric iron|Fe+++|Fe+3|ferric ion|fe(iii)}}
+
{{#set: ec number=EC-1.8.4.8}}
−
{{#set: consumed by=TransportSeed_FE+3|RXN-14387}}
+
{{#set: gene associated=Tiso_gene_15770}}
−
{{#set: produced by=TransportSeed_FE+3|RXN-12540|RXN-12541}}
+
{{#set: in pathway=SO4ASSIM-PWY}}
−
{{#set: consumed or produced by=ExchangeSeed_FE+3}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:48, 18 March 2018

Reaction 1.8.4.8-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 sulfite[c] + 1 an oxidized thioredoxin[c] + 2 H+[c] + 1 adenosine 3',5'-bisphosphate[c] <=> 1 a reduced thioredoxin[c] + 1 3'-phosphoadenylyl-sulfate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12171&oldid=26986"