Difference between revisions of "Tiso gene 5999"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-151 RXN1F-151] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Gene == Gene Tiso_gene_18135 == * left end position: ** 84 * transcription direction: ** POSITIVE * right end position: ** 2325 * centisome position: ** 2.6038437...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-151 RXN1F-151] ==
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== Gene Tiso_gene_18135 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 84
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
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** POSITIVE
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* right end position:
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** 2325
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* centisome position:
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** 2.6038437   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[3.4.25.1-RXN]]
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** 1 [[CPD1F-126]][c] '''=>''' 1 [[CPD1F-129]][c]
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** experimental_annotation
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* With common name(s):
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***automated-name-match
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** 1 γ-carotene[c] '''=>''' 1 all-trans-β-carotene[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1547]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_4457]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_3577]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8263]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6282]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_11980]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
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* [[PWY-5943]], β-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5943 PWY-5943]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=84}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32242 32242]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2325}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03824 R03824]
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{{#set: centisome position=2.6038437    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=3.4.25.1-RXN}}
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{{#set: ec number=EC-5.5.1.19}}
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{{#set: gene associated=Tiso_gene_1547|Tiso_gene_4457|Tiso_gene_3577|Tiso_gene_8263|Tiso_gene_6282|Tiso_gene_11980}}
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{{#set: in pathway=PWY-5943}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
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Revision as of 15:58, 10 January 2018

Gene Tiso_gene_18135

  • left end position:
    • 84
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2325
  • centisome position:
    • 2.6038437
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5999&oldid=11114"