Difference between revisions of "CPD-19179"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15745 RXN-15745] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GGPS GGPS] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl diphosphate synthase *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15745 RXN-15745] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GGPS GGPS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* ec number:
+
* common name:
** [http://enzyme.expasy.org/EC/1.1.5.3 EC-1.1.5.3]
+
** geranylgeranyl diphosphate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[ETR-Quinones]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c]
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** 1.0 [[DELTA3-ISOPENTENYL-PP]][h] '''+''' 1.0 [[FARNESYL-PP]][h] '''=>''' 1.0 [[PROTON]][h] '''+''' 1.0 [[GERANYLGERANYL-PP]][h] '''+''' 1.0 [[PPI]][h]
 
* With common name(s):
 
* With common name(s):
** 1 an electron-transfer quinone[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''=>''' 1 an electron-transfer quinol[c] '''+''' 1 glycerone phosphate[c]
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** 1.0 isopentenyl diphosphate[h] '''+''' 1.0 (2E,6E)-farnesyl diphosphate[h] '''=>''' 1.0 H+[h] '''+''' 1.0 geranylgeranyl diphosphate[h] '''+''' 1.0 diphosphate[h]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_15777]]
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* [[Tiso_gene_16284]]
** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_2848]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_18201]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-4261]], glycerol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4261 PWY-4261]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6118]], glycerol-3-phosphate shuttle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6118 PWY-6118]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6952]], glycerophosphodiester degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6952 PWY-6952]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[orthology]]
** [[pantograph]]:
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** Source: [[orthology-creinhardtii]]
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-1.1.5.3}}
+
{{#set: common name=geranylgeranyl diphosphate synthase}}
{{#set: gene associated=Tiso_gene_15777}}
+
{{#set: gene associated=Tiso_gene_16284|Tiso_gene_2848|Tiso_gene_18201}}
{{#set: in pathway=PWY-4261|PWY-6118|PWY-6952}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 18:48, 18 March 2018

Reaction GGPS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • geranylgeranyl diphosphate synthase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links