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− | [[Category:Reaction]] | + | [[Category:Metabolite]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYMIDYLATESYN-RXN THYMIDYLATESYN-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Ubiquitin-C-Terminal-Glycine Ubiquitin-C-Terminal-Glycine] == |
− | * direction:
| + | |
− | ** LEFT-TO-RIGHT
| + | |
| * common name: | | * common name: |
− | ** thymidylate_synthase | + | ** a [ubiquitin] C-terminal glycine |
− | ** ORF
| + | |
− | * ec number:
| + | |
− | ** [http://enzyme.expasy.org/EC/2.1.1.45 EC-2.1.1.45]
| + | |
| * Synonym(s): | | * Synonym(s): |
| + | ** a C-terminal [ubiquitin]-glycine |
| | | |
− | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
− | * With identifiers:
| + | * [[UBIQUITIN--PROTEIN-LIGASE-RXN]] |
− | ** 1 [[DUMP]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''=>''' 1 [[DIHYDROFOLATE-GLU-N]][c] '''+''' 1 [[TMP]][c]
| + | == Reaction(s) known to produce the compound == |
− | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
− | ** 1 dUMP[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''=>''' 1 a 7,8-dihydrofolate[c] '''+''' 1 dTMP[c]
| + | |
− | | + | |
− | == Genes associated with this reaction == | + | |
− | Genes have been associated with this reaction based on different elements listed below.
| + | |
− | * [[Tiso_gene_7708]] | + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | * [[Tiso_gene_18478]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | == Pathways ==
| + | |
− | * [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
| + | |
− | ** '''8''' reactions found over '''8''' reactions in the full pathway
| + | |
− | * [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
| + | |
− | ** '''6''' reactions found over '''7''' reactions in the full pathway
| + | |
− | * [[PWY-7199]], pyrimidine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7199 PWY-7199]
| + | |
− | ** '''1''' reactions found over '''5''' reactions in the full pathway
| + | |
− | * [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
| + | |
− | ** '''9''' reactions found over '''11''' reactions in the full pathway
| + | |
− | * [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
| + | |
− | ** '''9''' reactions found over '''9''' reactions in the full pathway
| + | |
− | * [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187]
| + | |
− | ** '''4''' reactions found over '''7''' reactions in the full pathway
| + | |
− | * [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
| + | |
− | ** '''12''' reactions found over '''17''' reactions in the full pathway
| + | |
− | * [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
| + | |
− | ** '''7''' reactions found over '''9''' reactions in the full pathway
| + | |
− | == Reconstruction information ==
| + | |
− | * [[manual]]:
| + | |
− | ** [[primary_network]]
| + | |
− | * [[annotation]]:
| + | |
− | ** [[pathwaytools]]:
| + | |
− | *** [[in-silico_annotation]]
| + | |
| == External links == | | == External links == |
− | * RHEA:
| + | {{#set: common name=a [ubiquitin] C-terminal glycine}} |
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12104 12104]
| + | {{#set: common name=a C-terminal [ubiquitin]-glycine}} |
− | * LIGAND-RXN:
| + | {{#set: consumed by=UBIQUITIN--PROTEIN-LIGASE-RXN}} |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R02101 R02101]
| + | |
− | * UNIPROT:
| + | |
− | ** [http://www.uniprot.org/uniprot/P19368 P19368]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q07422 Q07422]
| + | |
− | ** [http://www.uniprot.org/uniprot/P47469 P47469]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9JT57 Q9JT57]
| + | |
− | ** [http://www.uniprot.org/uniprot/P42326 P42326]
| + | |
− | ** [http://www.uniprot.org/uniprot/O02604 O02604]
| + | |
− | ** [http://www.uniprot.org/uniprot/P07382 P07382]
| + | |
− | ** [http://www.uniprot.org/uniprot/P16126 P16126]
| + | |
− | ** [http://www.uniprot.org/uniprot/P13922 P13922]
| + | |
− | ** [http://www.uniprot.org/uniprot/P20712 P20712]
| + | |
− | ** [http://www.uniprot.org/uniprot/P11044 P11044]
| + | |
− | ** [http://www.uniprot.org/uniprot/P45350 P45350]
| + | |
− | ** [http://www.uniprot.org/uniprot/P45352 P45352]
| + | |
− | ** [http://www.uniprot.org/uniprot/P51820 P51820]
| + | |
− | ** [http://www.uniprot.org/uniprot/P0C0M4 P0C0M4]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q27828 Q27828]
| + | |
− | ** [http://www.uniprot.org/uniprot/P09249 P09249]
| + | |
− | ** [http://www.uniprot.org/uniprot/P12462 P12462]
| + | |
− | ** [http://www.uniprot.org/uniprot/P07606 P07606]
| + | |
− | ** [http://www.uniprot.org/uniprot/P00471 P00471]
| + | |
− | ** [http://www.uniprot.org/uniprot/P0A884 P0A884]
| + | |
− | ** [http://www.uniprot.org/uniprot/P00469 P00469]
| + | |
− | ** [http://www.uniprot.org/uniprot/O81395 O81395]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q05763 Q05763]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q39687 Q39687]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9YTJ6 Q9YTJ6]
| + | |
− | ** [http://www.uniprot.org/uniprot/P06785 P06785]
| + | |
− | ** [http://www.uniprot.org/uniprot/P04818 P04818]
| + | |
− | ** [http://www.uniprot.org/uniprot/P07607 P07607]
| + | |
− | ** [http://www.uniprot.org/uniprot/P13100 P13100]
| + | |
− | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
− | {{#set: common name=thymidylate_synthase}} | + | |
− | {{#set: common name=ORF}} | + | |
− | {{#set: ec number=EC-2.1.1.45}}
| + | |
− | {{#set: gene associated=Tiso_gene_7708|Tiso_gene_18478}} | + | |
− | {{#set: in pathway=PWY-7210|PWY-7198|PWY-7199|PWY-3841|PWY-7184|PWY-7187|PWY0-166|1CMET2-PWY}}
| + | |
− | {{#set: reconstruction category=manual}}
| + | |
− | {{#set: reconstruction source=primary_network}}
| + | |
− | {{#set: reconstruction category=annotation}}
| + | |
− | {{#set: reconstruction tool=pathwaytools}}
| + | |
− | {{#set: reconstruction source=in-silico_annotation}}
| + | |