Difference between revisions of "3-HYDROXYDECANOYL-ACP-DEHYDR-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8391 RXN-8391] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-carrier-prote...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18208 RXN-18208] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydrogenas...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8391 RXN-8391] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18208 RXN-18208] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 3-oxoacyl-(acyl-carrier-protein)_synthase
+
** 3-isopropylmalate dehydrogenase
−
** ORF
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.3.1.179 EC-2.3.1.179]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[Delta4-hexadecenoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-petroselinoyl-ACPs]][c]
+
** 1 [[CPDQT-36]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-19491]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a (4Z)-hexadec-4-enoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-petroselinoyl-[acp][c]
+
** 1 3-(3'-methylthio)propylmalate[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 3-isopropyl-6-(methylthio)-2-oxohexanoate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_19302]]
+
* [[Tiso_gene_2920]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
−
***EC-NUMBER
 
−
* [[Tiso_gene_14485]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_19303]]
 
−
** IN-SILICO_ANNOTATION
 
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5367]], petroselinate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5367 PWY-5367]
+
* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''10''' reactions found over '''30''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pathwaytools]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)_synthase}}
+
{{#set: common name=3-isopropylmalate dehydrogenase}}
−
{{#set: common name=ORF}}
+
{{#set: gene associated=Tiso_gene_2920}}
−
{{#set: ec number=EC-2.3.1.179}}
+
{{#set: in pathway=PWYQT-4450}}
−
{{#set: gene associated=Tiso_gene_19302|Tiso_gene_14485|Tiso_gene_19303}}
+
−
{{#set: in pathway=PWY-5367}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 18:49, 18 March 2018

Reaction RXN-18208

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-(3'-methylthio)propylmalate[c] + 1 NAD+[c] <=> 1 NADH[c] + 1 3-isopropyl-6-(methylthio)-2-oxohexanoate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYQT-4450, aliphatic glucosinolate biosynthesis, side chain elongation cycle: PWYQT-4450
    • 10 reactions found over 30 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3-HYDROXYDECANOYL-ACP-DEHYDR-RXN&oldid=27137"