Difference between revisions of "CPD-3617"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] == * direction: ** LEFT-TO-RIGHT * common name: ** proline,2-oxoglutarate-...")
(Created page with "Category:Gene == Gene Tiso_gene_16772 == * left end position: ** 376 * transcription direction: ** POSITIVE * right end position: ** 1379 * centisome position: ** 9.106321...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] ==
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== Gene Tiso_gene_16772 ==
* direction:
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* left end position:
** LEFT-TO-RIGHT
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** 376
* common name:
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* transcription direction:
** proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline)
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** POSITIVE
* ec number:
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* right end position:
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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** 1379
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* centisome position:
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** 9.106321   
 
* Synonym(s):
 
* Synonym(s):
** prolyl hydroxylase
 
** prolyl 4-hydroxylase
 
** proline,2-oxoglutarate 4-dioxygenase
 
** proline hydroxylase
 
** protocollagen hydroxylase
 
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[2.4.1.83-RXN]]
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PRO]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[4-HYDROXY-L-PROLINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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** in-silico_annotation
* With common name(s):
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***ec-number
** 1 oxygen[c] '''+''' 1 L-proline[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 trans-4-hydroxy-L-proline[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2158]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17593]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18145]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18933]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6296]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2280]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19638]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18208]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_292]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9873]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18235]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1468]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15594]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9035]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15328]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16842]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3021]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9227]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16122]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17919]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17823]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18689]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8652]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9455]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9165]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9636]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
* [[Tiso_gene_13008]]
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* [[RXN-16602]]
** [[pantograph]]-[[athaliana]]
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** in-silico_annotation
** [[pantograph]]-[[creinhardtii]]
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***ec-number
== Pathways ==
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== Pathways associated ==
== Reconstruction information  ==
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* [[PWY-7661]]
* [[orthology]]:
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: left end position=376}}
** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252]
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{{#set: transcription direction=POSITIVE}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1379}}
{{#set: common name=proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline)}}
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{{#set: centisome position=9.106321    }}
{{#set: ec number=EC-1.14.11}}
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{{#set: reaction associated=2.4.1.83-RXN|RXN-16602}}
{{#set: common name=prolyl hydroxylase|prolyl 4-hydroxylase|proline,2-oxoglutarate 4-dioxygenase|proline hydroxylase|protocollagen hydroxylase}}
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{{#set: pathway associated=PWY-7661|MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
{{#set: gene associated=Tiso_gene_2158|Tiso_gene_17593|Tiso_gene_18145|Tiso_gene_18933|Tiso_gene_6296|Tiso_gene_2280|Tiso_gene_19638|Tiso_gene_18208|Tiso_gene_292|Tiso_gene_9873|Tiso_gene_18235|Tiso_gene_1468|Tiso_gene_15594|Tiso_gene_9035|Tiso_gene_15328|Tiso_gene_16842|Tiso_gene_3021|Tiso_gene_9227|Tiso_gene_16122|Tiso_gene_17919|Tiso_gene_17823|Tiso_gene_18689|Tiso_gene_8652|Tiso_gene_9455|Tiso_gene_9165|Tiso_gene_9636|Tiso_gene_13008}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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Revision as of 18:50, 18 March 2018

Gene Tiso_gene_16772

  • left end position:
    • 376
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1379
  • centisome position:
    • 9.106321
  • Synonym(s):

Reactions associated

Pathways associated

External links