Difference between revisions of "DNA-6-O-Methyl-Guanines"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLGLUTPREDUCT-RXN N-ACETYLGLUTPREDUCT-RXN] == * direction: ** REVERSIBLE * common name: ** n-...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NITRATE NITRATE] == * smiles: ** N(=O)(=O)[O-] * inchi key: ** InChIKey=NHNBFGGVMKEFGY-UHFFFAOY...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLGLUTPREDUCT-RXN N-ACETYLGLUTPREDUCT-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NITRATE NITRATE] ==
−
* direction:
+
* smiles:
−
** REVERSIBLE
+
** N(=O)(=O)[O-]
 +
* inchi key:
 +
** InChIKey=NHNBFGGVMKEFGY-UHFFFAOYSA-N
 
* common name:
 
* common name:
−
** n-acetyl-gamma-glutamyl-phosphate_reductase
+
** nitrate
−
** ORF
+
* molecular weight:
−
* ec number:
+
** 62.005   
−
** [http://enzyme.expasy.org/EC/1.2.1.38 EC-1.2.1.38]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** NO3
 +
** NO3-
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[TransportSeed_NITRATE]]
−
** 1 [[CPD-469]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[N-ACETYL-GLUTAMYL-P]][c]
+
* [[NITRATE-REDUCTASE-NADH-RXN]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 N-acetyl-L-glutamate 5-semialdehyde[c] '''+''' 1 NADP+[c] '''+''' 1 phosphate[c] '''<=>''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 N-acetylglutamyl-phosphate[c]
+
* [[TransportSeed_NITRATE]]
−
 
+
* [[NODOy]]
−
== Genes associated with this reaction  ==
+
* [[NODOx]]
−
Genes have been associated with this reaction based on different elements listed below.
+
== Reaction(s) of unknown directionality ==
−
* [[Tiso_gene_6700]]
+
* [[ExchangeSeed_NITRATE]]
−
** IN-SILICO_ANNOTATION
+
* [[NO3t]]
−
***EC-NUMBER
+
* [[TCV3]]
−
* [[Tiso_gene_8102]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
== Pathways  ==
+
−
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
−
* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[creinhardtii]]
+
−
*** [[synechocystis]]
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 14797-55-8
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21588 21588]
+
* Wikipedia : Nitrate
−
* LIGAND-RXN:
+
* PUBCHEM:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03443 R03443]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=943 943]
−
* UNIPROT:
+
* HMDB : HMDB02878
−
** [http://www.uniprot.org/uniprot/P54898 P54898]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/Q9JVU6 Q9JVU6]
+
** [http://www.genome.jp/dbget-bin/www_bget?C00244 C00244]
−
** [http://www.uniprot.org/uniprot/O67724 O67724]
+
* CHEMSPIDER:
−
** [http://www.uniprot.org/uniprot/O28208 O28208]
+
** [http://www.chemspider.com/Chemical-Structure.918.html 918]
−
** [http://www.uniprot.org/uniprot/Q9PIS0 Q9PIS0]
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/P23715 P23715]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17632 17632]
−
** [http://www.uniprot.org/uniprot/P11446 P11446]
+
* BIGG : no3
−
** [http://www.uniprot.org/uniprot/Q01217 Q01217]
+
{{#set: smiles=N(=O)(=O)[O-]}}
−
** [http://www.uniprot.org/uniprot/P31318 P31318]
+
{{#set: inchi key=InChIKey=NHNBFGGVMKEFGY-UHFFFAOYSA-N}}
−
** [http://www.uniprot.org/uniprot/P54895 P54895]
+
{{#set: common name=nitrate}}
−
** [http://www.uniprot.org/uniprot/P54894 P54894]
+
{{#set: molecular weight=62.005    }}
−
** [http://www.uniprot.org/uniprot/Q07906 Q07906]
+
{{#set: common name=NO3|NO3-}}
−
** [http://www.uniprot.org/uniprot/P54899 P54899]
+
{{#set: consumed by=TransportSeed_NITRATE|NITRATE-REDUCTASE-NADH-RXN}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: produced by=TransportSeed_NITRATE|NODOy|NODOx}}
−
{{#set: common name=n-acetyl-gamma-glutamyl-phosphate_reductase}}
+
{{#set: reversible reaction associated=ExchangeSeed_NITRATE|NO3t|TCV3}}
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-1.2.1.38}}
+
−
{{#set: gene associated=Tiso_gene_6700|Tiso_gene_8102}}
+
−
{{#set: in pathway=PWY-5154|GLUTORN-PWY|ARGSYNBSUB-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:50, 18 March 2018

Metabolite NITRATE

  • smiles:
    • N(=O)(=O)[O-]
  • inchi key:
    • InChIKey=NHNBFGGVMKEFGY-UHFFFAOYSA-N
  • common name:
    • nitrate
  • molecular weight:
    • 62.005
  • Synonym(s):
    • NO3
    • NO3-

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 14797-55-8
  • Wikipedia : Nitrate
  • PUBCHEM:
  • HMDB : HMDB02878
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : no3
"N(=O)(=O)[O-" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DNA-6-O-Methyl-Guanines&oldid=27182"