Difference between revisions of "DNA-6-O-Methyl-Guanines"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLGLUTPREDUCT-RXN N-ACETYLGLUTPREDUCT-RXN] == * direction: ** REVERSIBLE * common name: ** n-...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NITRATE NITRATE] == * smiles: ** N(=O)(=O)[O-] * inchi key: ** InChIKey=NHNBFGGVMKEFGY-UHFFFAOY...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLGLUTPREDUCT-RXN N-ACETYLGLUTPREDUCT-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NITRATE NITRATE] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** N(=O)(=O)[O-]
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* inchi key:
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** InChIKey=NHNBFGGVMKEFGY-UHFFFAOYSA-N
 
* common name:
 
* common name:
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** n-acetyl-gamma-glutamyl-phosphate_reductase
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** nitrate
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** ORF
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* molecular weight:
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* ec number:
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** 62.005   
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** [http://enzyme.expasy.org/EC/1.2.1.38 EC-1.2.1.38]
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* Synonym(s):
 
* Synonym(s):
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** NO3
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** NO3-
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[TransportSeed_NITRATE]]
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** 1 [[CPD-469]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[N-ACETYL-GLUTAMYL-P]][c]
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* [[NITRATE-REDUCTASE-NADH-RXN]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 N-acetyl-L-glutamate 5-semialdehyde[c] '''+''' 1 NADP+[c] '''+''' 1 phosphate[c] '''<=>''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 N-acetylglutamyl-phosphate[c]
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* [[TransportSeed_NITRATE]]
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* [[NODOy]]
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== Genes associated with this reaction  ==
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* [[NODOx]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* [[Tiso_gene_6700]]
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* [[ExchangeSeed_NITRATE]]
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** IN-SILICO_ANNOTATION
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* [[NO3t]]
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***EC-NUMBER
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* [[TCV3]]
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* [[Tiso_gene_8102]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 14797-55-8
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21588 21588]
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* Wikipedia : Nitrate
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R03443 R03443]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=943 943]
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* UNIPROT:
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* HMDB : HMDB02878
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** [http://www.uniprot.org/uniprot/P54898 P54898]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9JVU6 Q9JVU6]
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** [http://www.genome.jp/dbget-bin/www_bget?C00244 C00244]
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** [http://www.uniprot.org/uniprot/O67724 O67724]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/O28208 O28208]
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** [http://www.chemspider.com/Chemical-Structure.918.html 918]
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** [http://www.uniprot.org/uniprot/Q9PIS0 Q9PIS0]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P23715 P23715]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17632 17632]
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** [http://www.uniprot.org/uniprot/P11446 P11446]
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* BIGG : no3
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** [http://www.uniprot.org/uniprot/Q01217 Q01217]
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{{#set: smiles=N(=O)(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/P31318 P31318]
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{{#set: inchi key=InChIKey=NHNBFGGVMKEFGY-UHFFFAOYSA-N}}
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** [http://www.uniprot.org/uniprot/P54895 P54895]
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{{#set: common name=nitrate}}
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** [http://www.uniprot.org/uniprot/P54894 P54894]
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{{#set: molecular weight=62.005    }}
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** [http://www.uniprot.org/uniprot/Q07906 Q07906]
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{{#set: common name=NO3|NO3-}}
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** [http://www.uniprot.org/uniprot/P54899 P54899]
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{{#set: consumed by=TransportSeed_NITRATE|NITRATE-REDUCTASE-NADH-RXN}}
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{{#set: direction=REVERSIBLE}}
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{{#set: produced by=TransportSeed_NITRATE|NODOy|NODOx}}
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{{#set: common name=n-acetyl-gamma-glutamyl-phosphate_reductase}}
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{{#set: reversible reaction associated=ExchangeSeed_NITRATE|NO3t|TCV3}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.2.1.38}}
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{{#set: gene associated=Tiso_gene_6700|Tiso_gene_8102}}
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{{#set: in pathway=PWY-5154|GLUTORN-PWY|ARGSYNBSUB-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:50, 18 March 2018

Metabolite NITRATE

  • smiles:
    • N(=O)(=O)[O-]
  • inchi key:
    • InChIKey=NHNBFGGVMKEFGY-UHFFFAOYSA-N
  • common name:
    • nitrate
  • molecular weight:
    • 62.005
  • Synonym(s):
    • NO3
    • NO3-

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 14797-55-8
  • Wikipedia : Nitrate
  • PUBCHEM:
  • HMDB : HMDB02878
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : no3
"N(=O)(=O)[O-" cannot be used as a page name in this wiki.




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