Difference between revisions of "Tiso gene 9109"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MCDH MCDH] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-methylacyl-coa dehydrogenase, 2-Met...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16096 RXN-16096] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MCDH MCDH] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16096 RXN-16096] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
+
* ec number:
−
** 2-methylacyl-coa dehydrogenase, 2-Methylprop-2-enoyl-CoA forming
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** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[FAD]][m] '''+''' 1.0 [[ISOBUTYRYL-COA]][m] '''=>''' 1.0 [[FADH2]][m] '''+''' 1.0 [[METHACRYLYL-COA]][m]
+
** 1 [[CPD-17347]][c] '''=>''' 1 [[CPD-17348]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 FAD[m] '''+''' 1.0 isobutanoyl-CoA[m] '''=>''' 1.0 FADH2[m] '''+''' 1.0 methylacrylyl-CoA[m]
+
** 1 (3R)-hydroxy-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c] '''=>''' 1 (2E, 11Z,14Z)-icosa-2,11,14-trienoyl-CoA[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_16113]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
−
* [[Tiso_gene_10643]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7601 PWY-7601]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7725 PWY-7725]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6598]], sciadonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2-methylacyl-coa dehydrogenase, 2-Methylprop-2-enoyl-CoA forming}}
+
{{#set: ec number=EC-4.2.1.134}}
−
{{#set: gene associated=Tiso_gene_16113|Tiso_gene_10643}}
+
{{#set: in pathway=PWY-7601|PWY-7725|PWY-6598}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=creinhardtii}}
+

Revision as of 18:50, 18 March 2018

Reaction RXN-16096

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (3R)-hydroxy-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c] => 1 (2E, 11Z,14Z)-icosa-2,11,14-trienoyl-CoA[c] + 1 H2O[c]

Genes associated with this reaction

Pathways

  • PWY-7601, arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): PWY-7601
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7725, arachidonate biosynthesis V (8-detaturase, mammals): PWY-7725
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6598, sciadonate biosynthesis: PWY-6598
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9109&oldid=27273"