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| | [[Category:Reaction]] | | [[Category:Reaction]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7005 RXN0-7005] == |
| | * direction: | | * direction: |
| | ** LEFT-TO-RIGHT | | ** LEFT-TO-RIGHT |
| − | * common name:
| |
| − | ** mitochondrial_tyrosyl-trna_synthetase
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| − | ** methionyl-trna
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| − | ** ORF
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| − | * ec number:
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| − | ** [http://enzyme.expasy.org/EC/6.1.1.1 EC-6.1.1.1]
| |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| | == Reaction Formula == | | == Reaction Formula == |
| | * With identifiers: | | * With identifiers: |
| − | ** 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[TYR-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-TYR-tRNAs]][c] | + | ** 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 2 [[E-]][c] '''+''' 3 [[PROTON]][c] '''=>''' 1 [[PRO]][c] |
| | * With common name(s): | | * With common name(s): |
| − | ** 1 L-tyrosine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAtyr[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-tyrosyl-[tRNAtyr][c] | + | ** |
| − | | + | |
| | == Genes associated with this reaction == | | == Genes associated with this reaction == |
| − | Genes have been associated with this reaction based on different elements listed below.
| |
| − | * [[Tiso_gene_10378]]
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| − | ** IN-SILICO_ANNOTATION
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| − | ***EC-NUMBER
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| − | ** EXPERIMENTAL_ANNOTATION
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| − | ***EC-NUMBER
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| − | ** [[pantograph]]-[[esiliculosus]]
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| − | * [[Tiso_gene_4175]]
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| − | ** IN-SILICO_ANNOTATION
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| − | ***EC-NUMBER
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| − | * [[Tiso_gene_4174]]
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| − | ** IN-SILICO_ANNOTATION
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| − | ***EC-NUMBER
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| − | ** EXPERIMENTAL_ANNOTATION
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| − | ***EC-NUMBER
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| − | * [[Tiso_gene_12171]]
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| − | ** IN-SILICO_ANNOTATION
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| − | ***EC-NUMBER
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| − | ** EXPERIMENTAL_ANNOTATION
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| − | ***EC-NUMBER
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| − | ** [[pantograph]]-[[esiliculosus]]
| |
| | == Pathways == | | == Pathways == |
| − | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
| |
| − | ** '''21''' reactions found over '''21''' reactions in the full pathway
| |
| | == Reconstruction information == | | == Reconstruction information == |
| − | * [[orthology]]: | + | * Category: [[annotation]] |
| − | ** [[pantograph]]:
| + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** [[esiliculosus]]
| + | *** Tool: [[pathwaytools]] |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]: | + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]] | + | |
| | == External links == | | == External links == |
| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10220 10220]
| |
| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02918 R02918]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/P28669 P28669]
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| − | ** [http://www.uniprot.org/uniprot/P22326 P22326]
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| − | ** [http://www.uniprot.org/uniprot/P36421 P36421]
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| − | ** [http://www.uniprot.org/uniprot/P41256 P41256]
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| − | ** [http://www.uniprot.org/uniprot/O51343 O51343]
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| − | ** [http://www.uniprot.org/uniprot/Q9PN27 Q9PN27]
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| − | ** [http://www.uniprot.org/uniprot/Q9CIH5 Q9CIH5]
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| − | ** [http://www.uniprot.org/uniprot/Q9ZL69 Q9ZL69]
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| − | ** [http://www.uniprot.org/uniprot/P47693 P47693]
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| − | ** [http://www.uniprot.org/uniprot/Q9ZCZ4 Q9ZCZ4]
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| − | ** [http://www.uniprot.org/uniprot/P43836 P43836]
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| − | ** [http://www.uniprot.org/uniprot/O83806 O83806]
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| − | ** [http://www.uniprot.org/uniprot/Q57834 Q57834]
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| − | ** [http://www.uniprot.org/uniprot/P56417 P56417]
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| − | ** [http://www.uniprot.org/uniprot/O67632 O67632]
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| − | ** [http://www.uniprot.org/uniprot/O58739 O58739]
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| − | ** [http://www.uniprot.org/uniprot/Q9WYU8 Q9WYU8]
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| − | ** [http://www.uniprot.org/uniprot/O27795 O27795]
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| − | ** [http://www.uniprot.org/uniprot/O84065 O84065]
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| − | ** [http://www.uniprot.org/uniprot/Q9JVY6 Q9JVY6]
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| − | ** [http://www.uniprot.org/uniprot/P48527 P48527]
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| − | ** [http://www.uniprot.org/uniprot/Q49900 Q49900]
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| − | ** [http://www.uniprot.org/uniprot/P75122 P75122]
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| − | ** [http://www.uniprot.org/uniprot/P73141 P73141]
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| − | ** [http://www.uniprot.org/uniprot/P73144 P73144]
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| − | ** [http://www.uniprot.org/uniprot/P95982 P95982]
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| − | ** [http://www.uniprot.org/uniprot/P00952 P00952]
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| − | ** [http://www.uniprot.org/uniprot/P04077 P04077]
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| − | ** [http://www.uniprot.org/uniprot/P0AGJ9 P0AGJ9]
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| − | ** [http://www.uniprot.org/uniprot/P12063 P12063]
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| − | ** [http://www.uniprot.org/uniprot/P93363 P93363]
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| − | ** [http://www.uniprot.org/uniprot/O14055 O14055]
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| | {{#set: direction=LEFT-TO-RIGHT}} | | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: common name=mitochondrial_tyrosyl-trna_synthetase}}
| + | {{#set: in pathway=}} |
| − | {{#set: common name=methionyl-trna}}
| + | |
| − | {{#set: common name=ORF}}
| + | |
| − | {{#set: ec number=EC-6.1.1.1}}
| + | |
| − | {{#set: gene associated=Tiso_gene_10378|Tiso_gene_4175|Tiso_gene_4174|Tiso_gene_12171}}
| + | |
| − | {{#set: in pathway=TRNA-CHARGING-PWY}} | + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=esiliculosus}}
| + | |
| | {{#set: reconstruction category=annotation}} | | {{#set: reconstruction category=annotation}} |
| | + | {{#set: reconstruction source=annotation-in-silico_annotation}} |
| | {{#set: reconstruction tool=pathwaytools}} | | {{#set: reconstruction tool=pathwaytools}} |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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