Difference between revisions of "ADENOSYLCOBALAMIN-5-P"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPREDUCT-RXN CDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diph...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=N-FORMYLMETHIONINE N-FORMYLMETHIONINE] == * smiles: ** CSCCC(N[CH]=O)C(=O)[O-] * inchi key: **...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPREDUCT-RXN CDPREDUCT-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=N-FORMYLMETHIONINE N-FORMYLMETHIONINE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CSCCC(N[CH]=O)C(=O)[O-]
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* inchi key:
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** InChIKey=PYUSHNKNPOHWEZ-YFKPBYRVSA-M
 
* common name:
 
* common name:
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** ribonucleoside-diphosphate_reductase
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** N-formyl-L-methionine
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
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** 176.21   
 
* Synonym(s):
 
* Synonym(s):
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** fMet
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** N-formyl-methionine
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** formylmethionine
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[FORMYLMETHIONINE-DEFORMYLASE-RXN]]
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** 1 [[CDP]][c] '''+''' 1 [[Red-Thioredoxin]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[DCDP]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 CDP[c] '''+''' 1 a reduced thioredoxin[c] '''=>''' 1 H2O[c] '''+''' 1 dCDP[c] '''+''' 1 an oxidized thioredoxin[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9915]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10138]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9916]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10617]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
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** '''12''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 4289-98-9
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28038 28038]
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* DRUGBANK : DB04464
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R02024 R02024]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5288223 5288223]
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{{#set: direction=LEFT-TO-RIGHT}}
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* HMDB : HMDB01015
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{{#set: common name=ribonucleoside-diphosphate_reductase}}
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* LIGAND-CPD:
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{{#set: ec number=EC-1.17.4.1}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03145 C03145]
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{{#set: gene associated=Tiso_gene_9915|Tiso_gene_10138|Tiso_gene_9916|Tiso_gene_10617}}
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* CHEBI:
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{{#set: in pathway=PWY-7184|PWY-7198|PWY-6545|PWY0-166|PWY-7210}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57809 57809]
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{{#set: reconstruction category=orthology}}
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{{#set: smiles=CSCCC(N[CH]=O)C(=O)[O-]}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: inchi key=InChIKey=PYUSHNKNPOHWEZ-YFKPBYRVSA-M}}
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{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
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{{#set: common name=N-formyl-L-methionine}}
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{{#set: reconstruction category=manual}}
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{{#set: molecular weight=176.21    }}
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{{#set: reconstruction source=primary_network}}
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{{#set: common name=fMet|N-formyl-methionine|formylmethionine}}
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{{#set: reconstruction category=annotation}}
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{{#set: consumed by=FORMYLMETHIONINE-DEFORMYLASE-RXN}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:51, 18 March 2018

Metabolite N-FORMYLMETHIONINE

  • smiles:
    • CSCCC(N[CH]=O)C(=O)[O-]
  • inchi key:
    • InChIKey=PYUSHNKNPOHWEZ-YFKPBYRVSA-M
  • common name:
    • N-formyl-L-methionine
  • molecular weight:
    • 176.21
  • Synonym(s):
    • fMet
    • N-formyl-methionine
    • formylmethionine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 4289-98-9
  • DRUGBANK : DB04464
  • PUBCHEM:
  • HMDB : HMDB01015
  • LIGAND-CPD:
  • CHEBI:
"CSCCC(N[CH]=O)C(=O)[O-" cannot be used as a page name in this wiki.



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