Difference between revisions of "Tiso gene 11251"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXINE-5P PYRIDOXINE-5P] == * smiles: ** CC1(=NC=C(COP([O-])(=O)[O-])C(=C(O)1)CO) * inchi k...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17918 RXN-17918] == * direction: ** LEFT-TO-RIGHT * common name: ** dna_ligase_mrna_capping_enz...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXINE-5P PYRIDOXINE-5P] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17918 RXN-17918] ==
−
* smiles:
+
* direction:
−
** CC1(=NC=C(COP([O-])(=O)[O-])C(=C(O)1)CO)
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=WHOMFKWHIQZTHY-UHFFFAOYSA-L
+
 
* common name:
 
* common name:
−
** pyridoxine 5'-phosphate
+
** dna_ligase_mrna_capping_enzyme
−
* molecular weight:
+
** dna_ligase
−
** 247.144   
+
** ORF
 
* Synonym(s):
 
* Synonym(s):
−
** pyridoxol 5'-phosphate
 
−
** pyridoxine 5-phosphate
 
−
** pyridoxine phosphate
 
−
** pyridoxine-5P
 
−
** pyridoxine-P
 
−
** [5-hydroxy-4-(hydroxymethyl)-6-methylpyridin-3-yl]methyl phosphate
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[PNPOXI-RXN]]
+
* With identifiers:
−
* [[RXN-14181]]
+
** 2 [[PROTON]][c] '''+''' 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[DNA-Ligase-L-lysine-adenylate]][c] '''=>''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''+''' 1 [[DNA-Ligase-L-lysine]][c]
−
== Reaction(s) known to produce the compound ==
+
* With common name(s):
−
* [[PNKIN-RXN]]
+
** 2 H+[c] '''+''' 1 a 5'-phospho-[DNA][c] '''+''' 1 a [DNA ligase]-N6-(5'-adenylyl)-L-lysine[c] '''=>''' 1 a 5'-(5'-diphosphoadenosine)-[DNA][c] '''+''' 1 a [DNA ligase]-L-lysine[c]
−
== Reaction(s) of unknown directionality ==
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_11251]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14249]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14250]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_12142]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6743]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3498]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 447-05-2
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* METABOLIGHTS : MTBLC58589
+
{{#set: common name=dna_ligase_mrna_capping_enzyme}}
−
* PUBCHEM:
+
{{#set: common name=dna_ligase}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=24794348 24794348]
+
{{#set: common name=ORF}}
−
* HMDB : HMDB01319
+
{{#set: gene associated=Tiso_gene_11251|Tiso_gene_14249|Tiso_gene_14250|Tiso_gene_12142|Tiso_gene_6743|Tiso_gene_3498}}
−
* LIGAND-CPD:
+
{{#set: in pathway=}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00627 C00627]
+
{{#set: reconstruction category=annotation}}
−
* CHEBI:
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58589 58589]
+
{{#set: reconstruction tool=pathwaytools}}
−
* BIGG : pdx5p
+
−
{{#set: smiles=CC1(=NC=C(COP([O-])(=O)[O-])C(=C(O)1)CO)}}
+
−
{{#set: inchi key=InChIKey=WHOMFKWHIQZTHY-UHFFFAOYSA-L}}
+
−
{{#set: common name=pyridoxine 5'-phosphate}}
+
−
{{#set: molecular weight=247.144    }}
+
−
{{#set: common name=pyridoxol 5'-phosphate|pyridoxine 5-phosphate|pyridoxine phosphate|pyridoxine-5P|pyridoxine-P|[5-hydroxy-4-(hydroxymethyl)-6-methylpyridin-3-yl]methyl phosphate}}
+
−
{{#set: consumed by=PNPOXI-RXN|RXN-14181}}
+
−
{{#set: produced by=PNKIN-RXN}}
+

Revision as of 18:52, 18 March 2018

Reaction RXN-17918

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dna_ligase_mrna_capping_enzyme
    • dna_ligase
    • ORF
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11251&oldid=27462"