Difference between revisions of "Tiso gene 14062"

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(Created page with "Category:Gene == Gene Tiso_gene_10395 == * Synonym(s): == Reactions associated == * GLUTDECARBOX-RXN ** pantograph-creinhardtii * LYSDECARBOX-RXN ** pan...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS-RXN KDOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-deoxy-d-manno-octul...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_10395 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS-RXN KDOTRANS-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** 3-deoxy-d-manno-octulosonic-acid_transferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.99.12 EC-2.4.99.12]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[GLUTDECARBOX-RXN]]
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* With identifiers:
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** [[pantograph]]-[[creinhardtii]]
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** 1 [[LIPID-IV-A]][c] '''+''' 1 [[CMP-KDO]][c] '''=>''' 1 [[KDO-LIPID-IVA]][c] '''+''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c]
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* [[LYSDECARBOX-RXN]]
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* With common name(s):
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** [[pantograph]]-[[synechocystis]]
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** 1 lipid IVA[c] '''+''' 1 CMP-3-deoxy-β-D-manno-octulosonate[c] '''=>''' 1 α-Kdo-(2→6)-lipid IVA[c] '''+''' 1 CMP[c] '''+''' 1 H+[c]
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== Pathways associated ==
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* [[PWY-4321]]
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== Genes associated with this reaction  ==
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* [[GLUDEG-I-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY0-461]]
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* [[Tiso_gene_14462]]
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* [[PWY0-1305]]
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** IN-SILICO_ANNOTATION
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* [[PWY-5468]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-6381]]
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* [[Tiso_gene_14463]]
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* [[PWY0-1303]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6328]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-6375]]
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** [[pantograph]]-[[athaliana]]
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* [[PWY-6376]]
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== Pathways ==
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* [[KDOSYN-PWY]], Kdo transfer to lipid IVA I: [http://metacyc.org/META/NEW-IMAGE?object=KDOSYN-PWY KDOSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7675]], Kdo transfer to lipid IVA II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7675 PWY-7675]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: reaction associated=GLUTDECARBOX-RXN|LYSDECARBOX-RXN}}
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* RHEA:
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{{#set: pathway associated=PWY-4321|GLUDEG-I-PWY|PWY0-461|PWY0-1305|PWY-5468|PWY-6381|PWY0-1303|PWY-6328|PWY-6375|PWY-6376}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28066 28066]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04658 R04658]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3-deoxy-d-manno-octulosonic-acid_transferase}}
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{{#set: ec number=EC-2.4.99.12}}
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{{#set: gene associated=Tiso_gene_14462|Tiso_gene_14463}}
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{{#set: in pathway=KDOSYN-PWY|PWY-7675}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 19:53, 18 March 2018

Reaction KDOTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-deoxy-d-manno-octulosonic-acid_transferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 lipid IVA[c] + 1 CMP-3-deoxy-β-D-manno-octulosonate[c] => 1 α-Kdo-(2→6)-lipid IVA[c] + 1 CMP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • KDOSYN-PWY, Kdo transfer to lipid IVA I: KDOSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7675, Kdo transfer to lipid IVA II: PWY-7675
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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