Difference between revisions of "ACCOAtx"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17109 RXN-17109] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
(Created page with "Category:Gene == Gene Tiso_gene_16028 == * left end position: ** 1941 * transcription direction: ** POSITIVE * right end position: ** 3492 * centisome position: ** 41.8228...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17109 RXN-17109] ==
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== Gene Tiso_gene_16028 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1941
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* common name:
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* transcription direction:
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** chloroplast_beta-keto_acyl_reductase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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** 3492
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* centisome position:
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** 41.822884   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PEROXID-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-17329]][c] '''=>''' 1 [[CPD-18489]][c] '''+''' 1 [[NADP]][c]
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** [[pantograph]]-[[esiliculosus]]
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* With common name(s):
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* [[RXN-12440]]
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 3-oxo-tetracosatetraenoyl-CoA[c] '''=>''' 1 (3R)-hydroxy-tetracosatetraenoyl-CoA[c] '''+''' 1 NADP+[c]
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** in-silico_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
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* [[RXN-14240]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9871]]
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* [[RXN-15288]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[esiliculosus]]
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***EC-NUMBER
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* [[RXN-3521]]
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** EXPERIMENTAL_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***automated-name-match
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== Pathways ==
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* [[RXN-8635]]
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
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** [[pantograph]]-[[esiliculosus]]
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** '''5''' reactions found over '''13''' reactions in the full pathway
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== Pathways associated ==
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== Reconstruction information  ==
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* [[PWY-7214]]
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* [[annotation]]:
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* [[PWY-6959]]
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** [[pathwaytools]]:
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* [[PWY-5461]]
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*** [[experimental_annotation]]
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* [[PWY-7445]]
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*** [[in-silico_annotation]]
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* [[PWY-6960]]
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* [[PWY-6961]]
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* [[PWY-2261]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=1941}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: right end position=3492}}
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{{#set: gene associated=Tiso_gene_9871}}
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{{#set: centisome position=41.822884    }}
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{{#set: in pathway=PWY-7726}}
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{{#set: reaction associated=PEROXID-RXN|RXN-12440|RXN-14240|RXN-15288|RXN-3521|RXN-8635}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-7214|PWY-6959|PWY-5461|PWY-7445|PWY-6960|PWY-6961|PWY-2261}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:53, 18 March 2018

Gene Tiso_gene_16028

  • left end position:
    • 1941
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3492
  • centisome position:
    • 41.822884
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ACCOAtx&oldid=27573"