Difference between revisions of "AIRS-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_3233 == * left end position: ** 14957 * transcription direction: ** NEGATIVE * right end position: ** 17016 * centisome position: ** 87.141...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5217 RXN0-5217] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_3233 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5217 RXN0-5217] ==
* left end position:
+
* direction:
** 14957
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** NEGATIVE
+
** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
* right end position:
+
** 17016
+
* centisome position:
+
** 87.14170   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* [[GSHTRAN-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CADAVERINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD0-1065]][c] '''+''' 1 [[5-METHYLTHIOADENOSINE]][c]
***ec-number
+
* With common name(s):
** experimental_annotation
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** 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 cadaverine[c] '''=>''' 1 H+[c] '''+''' 1 aminopropylcadaverine[c] '''+''' 1 S-methyl-5'-thioadenosine[c]
***ec-number
+
 
* [[GST-RXN]]
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== Genes associated with this reaction  ==
** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
***ec-number
+
* [[Tiso_gene_17803]]
** experimental_annotation
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** [[pantograph]]-[[athaliana]]
***ec-number
+
** [[pantograph]]-[[esiliculosus]]
* [[RXN-13673]]
+
== Pathways  ==
** in-silico_annotation
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* [[PWY0-1303]], aminopropylcadaverine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1303 PWY0-1303]
***ec-number
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** '''2''' reactions found over '''2''' reactions in the full pathway
** experimental_annotation
+
== Reconstruction information  ==
***ec-number
+
* Category: [[orthology]]
* [[RXN-15680]]
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** Source: [[orthology-athaliana]]
** in-silico_annotation
+
*** Tool: [[pantograph]]
***ec-number
+
** Source: [[orthology-esiliculosus]]
** experimental_annotation
+
*** Tool: [[pantograph]]
***ec-number
+
== Pathways associated ==
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* [[PWY-7112]]
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* [[PWY-6842]]
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* [[PWY-4061]]
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* [[PWY-7533]]
+
 
== External links  ==
 
== External links  ==
{{#set: left end position=14957}}
+
* RHEA:
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33387 33387]
{{#set: right end position=17016}}
+
* LIGAND-RXN:
{{#set: centisome position=87.14170    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R08359 R08359]
{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
+
{{#set: ec number=EC-2.5.1}}
 +
{{#set: gene associated=Tiso_gene_17803}}
 +
{{#set: in pathway=PWY0-1303}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:53, 18 March 2018

Reaction RXN0-5217

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1303, aminopropylcadaverine biosynthesis: PWY0-1303
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links