Difference between revisions of "Tiso gene 9140"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URPHOS-RXN URPHOS-RXN] == * direction: ** REVERSIBLE * common name: ** uridine_phosphorylase * ec n...")
(Created page with "Category:Gene == Gene Tiso_gene_16225 == * left end position: ** 74 * transcription direction: ** POSITIVE * right end position: ** 1981 * centisome position: ** 1.6455415...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URPHOS-RXN URPHOS-RXN] ==
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== Gene Tiso_gene_16225 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 74
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* common name:
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* transcription direction:
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** uridine_phosphorylase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.4.2.2 EC-2.4.2.2]
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** 1981
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** [http://enzyme.expasy.org/EC/2.4.2.3 EC-2.4.2.3]
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* centisome position:
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** 1.6455415   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN]]
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** 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c] '''<=>''' 1 [[RIBOSE-1P]][c] '''+''' 1 [[URACIL]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 phosphate[c] '''+''' 1 uridine[c] '''<=>''' 1 &alpha;-D-ribose-1-phosphate[c] '''+''' 1 uracil[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_20384]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-5532]], nucleoside and nucleotide degradation (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5532 PWY-5532]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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* [[PWY0-1295]], pyrimidine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1295 PWY0-1295]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=74}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24388 24388]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1981}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01876 R01876]
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{{#set: centisome position=1.6455415    }}
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* UNIPROT:
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{{#set: reaction associated=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN}}
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** [http://www.uniprot.org/uniprot/P52624 P52624]
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** [http://www.uniprot.org/uniprot/P43770 P43770]
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** [http://www.uniprot.org/uniprot/Q16831 Q16831]
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** [http://www.uniprot.org/uniprot/P12758 P12758]
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** [http://www.uniprot.org/uniprot/P19662 P19662]
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** [http://www.uniprot.org/uniprot/O08444 O08444]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=uridine_phosphorylase}}
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{{#set: ec number=EC-2.4.2.2}}
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{{#set: ec number=EC-2.4.2.3}}
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{{#set: gene associated=Tiso_gene_20384}}
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{{#set: in pathway=PWY-5532|PWY0-1295}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:53, 18 March 2018

Gene Tiso_gene_16225

  • left end position:
    • 74
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1981
  • centisome position:
    • 1.6455415
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9140&oldid=27613"