Difference between revisions of "PWY-6537"

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(Created page with "Category:Gene == Gene Tiso_gene_10116 == * left end position: ** 3216 * transcription direction: ** NEGATIVE * right end position: ** 5027 * centisome position: ** 28.4727...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_10116 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] ==
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* left end position:
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* direction:
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** 3216
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** retinyl-palmitate esterase
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* right end position:
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** ORF
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** 5027
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** serine_esterase
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* centisome position:
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** sialate_o-acetylesterase-like_protein
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** 28.472775   
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** lysophospholipase
 +
** alpha_beta_hydrolase
 +
** alpha_beta_hydrolase_fold_protein
 +
** protein_chloroplastic
 +
** para-nitrobenzyl_esterase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
 +
** retinyl palmitate hydrolase
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** retinyl palmitate hydrolyase
 +
** retinyl ester hydrolase
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[KETOACYLCOATHIOL-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[CHOCOLA_A]][c] '''=>''' 1 [[Retinols]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 H2O[c] '''+''' 1 all-trans-retinyl palmitate[c] '''=>''' 1 a retinol[c] '''+''' 1 palmitate[c] '''+''' 1 H+[c]
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***ec-number
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* [[RXN-10699]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* [[Tiso_gene_2556]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-10700]]
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* [[Tiso_gene_12686]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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** experimental_annotation
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* [[Tiso_gene_1537]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN-10701]]
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***AUTOMATED-NAME-MATCH
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** in-silico_annotation
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** [[pantograph]]-[[esiliculosus]]
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***ec-number
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* [[Tiso_gene_1922]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-11246]]
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* [[Tiso_gene_4650]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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** experimental_annotation
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** [[pantograph]]-[[esiliculosus]]
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***ec-number
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* [[Tiso_gene_17029]]
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* [[RXN-12565]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_10066]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-12710]]
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* [[Tiso_gene_9429]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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** experimental_annotation
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* [[Tiso_gene_16518]]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-13617]]
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* [[Tiso_gene_11351]]
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** in-silico_annotation
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** EXPERIMENTAL_ANNOTATION
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***ec-number
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***AUTOMATED-NAME-MATCH
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** experimental_annotation
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* [[Tiso_gene_4606]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN-14268]]
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***EC-NUMBER
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** in-silico_annotation
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* [[Tiso_gene_19778]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_1538]]
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* [[RXN-14274]]
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** [[pantograph]]-[[esiliculosus]]
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** in-silico_annotation
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== Pathways  ==
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***ec-number
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== Reconstruction information  ==
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** experimental_annotation
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* [[orthology]]:
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***ec-number
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** [[pantograph]]:
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* [[RXN-14277]]
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*** [[esiliculosus]]
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** in-silico_annotation
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* [[annotation]]:
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***ec-number
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** [[pathwaytools]]:
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** experimental_annotation
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*** [[experimental_annotation]]
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***ec-number
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*** [[in-silico_annotation]]
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* [[RXN-14394]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14774]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14788]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14793]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14799]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14803]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-16137]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17116]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17778]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17782]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17787]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17791]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17795]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17799]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-6435]]
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* [[PWY-7654]]
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−
* [[PWY66-391]]
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−
* [[PWY-7606]]
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−
* [[PWY-7337]]
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−
* [[PWY-7340]]
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* [[PWY-7338]]
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* [[PWY-7094]]
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* [[PWY-6946]]
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* [[PWY-7288]]
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−
* [[PWY-735]]
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* [[PWY-5136]]
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* [[PWY-7726]]
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* [[PWY-6863]]
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* [[PWY-7339]]
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* [[PWY-6948]]
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* [[FAO-PWY]]
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* [[PWY-6945]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=3216}}
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* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21508 21508]
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{{#set: right end position=5027}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=28.472775    }}
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{{#set: common name=retinyl-palmitate esterase}}
−
{{#set: reaction associated=KETOACYLCOATHIOL-RXN|RXN-10699|RXN-10700|RXN-10701|RXN-11246|RXN-12565|RXN-12710|RXN-13617|RXN-14268|RXN-14274|RXN-14277|RXN-14394|RXN-14774|RXN-14788|RXN-14793|RXN-14799|RXN-14803|RXN-16137|RXN-17116|RXN-17778|RXN-17782|RXN-17787|RXN-17791|RXN-17795|RXN-17799}}
+
{{#set: common name=ORF}}
−
{{#set: pathway associated=PWY-6435|PWY-7654|PWY66-391|PWY-7606|PWY-7337|PWY-7340|PWY-7338|PWY-7094|PWY-6946|PWY-7288|PWY-735|PWY-5136|PWY-7726|PWY-6863|PWY-7339|PWY-6948|FAO-PWY|PWY-6945}}
+
{{#set: common name=serine_esterase}}
 +
{{#set: common name=sialate_o-acetylesterase-like_protein}}
 +
{{#set: common name=lysophospholipase}}
 +
{{#set: common name=alpha_beta_hydrolase}}
 +
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
 +
{{#set: common name=protein_chloroplastic}}
 +
{{#set: common name=para-nitrobenzyl_esterase}}
 +
{{#set: ec number=EC-3.1.1.1}}
 +
{{#set: common name=retinyl palmitate hydrolase|retinyl palmitate hydrolyase|retinyl ester hydrolase}}
 +
{{#set: gene associated=Tiso_gene_2556|Tiso_gene_12686|Tiso_gene_1537|Tiso_gene_1922|Tiso_gene_4650|Tiso_gene_17029|Tiso_gene_10066|Tiso_gene_9429|Tiso_gene_16518|Tiso_gene_11351|Tiso_gene_4606|Tiso_gene_19778|Tiso_gene_1538}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:00, 10 January 2018

Reaction RETINYL-PALMITATE-ESTERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • retinyl-palmitate esterase
    • ORF
    • serine_esterase
    • sialate_o-acetylesterase-like_protein
    • lysophospholipase
    • alpha_beta_hydrolase
    • alpha_beta_hydrolase_fold_protein
    • protein_chloroplastic
    • para-nitrobenzyl_esterase
  • ec number:
  • Synonym(s):
    • retinyl palmitate hydrolase
    • retinyl palmitate hydrolyase
    • retinyl ester hydrolase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 all-trans-retinyl palmitate[c] => 1 a retinol[c] + 1 palmitate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links











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