Difference between revisions of "GUANOSINE-5DP-3DP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.25-RXN 1.2.1.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methyl-2-oxobutanoa...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.25-RXN 1.2.1.25-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** 3-methyl-2-oxobutanoate_dehydrogenase
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** formaldehyde assimilation I (serine pathway)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.2.1.25 EC-1.2.1.25]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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* '''5''' reaction(s) found
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** 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ISOBUTYRYL-COA]][c]
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** [[RXN-2881]]
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* With common name(s):
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** [[GLYOHMETRANS-RXN]]
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** 1 3-methyl-2-oxobutanoate[c] '''+''' 1 NAD+[c] '''+''' 1 coenzyme A[c] '''=>''' 1 NADH[c] '''+''' 1 CO2[c] '''+''' 1 isobutanoyl-CoA[c]
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** [[2PGADEHYDRAT-RXN]]
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** [[RXN-15513]]
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== Genes associated with this reaction ==
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** [[MALATE-DEH-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* [[Tiso_gene_11793]]
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* '''8''' reaction(s) not found
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
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***AUTOMATED-NAME-MATCH
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** [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN]
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* [[Tiso_gene_3260]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-2802 RXN-2802]
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** EXPERIMENTAL_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN]
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***AUTOMATED-NAME-MATCH
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** [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPYRUVATE-REDUCTASE-RXN HYDROXYPYRUVATE-REDUCTASE-RXN]
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== Pathways  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]
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* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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** [http://metacyc.org/META/NEW-IMAGE?object=MALATE--COA-LIGASE-RXN MALATE--COA-LIGASE-RXN]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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** [http://metacyc.org/META/NEW-IMAGE?object=GKI-RXN GKI-RXN]
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13997 13997]
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{{#set: common name=formaldehyde assimilation I (serine pathway)}}
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* LIGAND-RXN:
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{{#set: reaction found=5}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01210 R01210]
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{{#set: reaction not found=8}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3-methyl-2-oxobutanoate_dehydrogenase}}
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{{#set: ec number=EC-1.2.1.25}}
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{{#set: gene associated=Tiso_gene_11793|Tiso_gene_3260}}
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{{#set: in pathway=VALDEG-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:00, 10 January 2018

Pathway PWY-1622

  • taxonomic range:
  • common name:
    • formaldehyde assimilation I (serine pathway)
  • Synonym(s):

Reaction(s) found

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GUANOSINE-5DP-3DP&oldid=11204"