Difference between revisions of "Tiso gene 6012"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTPPYPHOSKIN-RXN GTPPYPHOSKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ca2+-activate...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8120 CPD-8120] == * smiles: ** CCCCCC=CCC=CCC=CCCCCCCC(=O)[O-] * inchi key: ** InChIKey=HOB...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTPPYPHOSKIN-RXN GTPPYPHOSKIN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8120 CPD-8120] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCC=CCC=CCC=CCCCCCCC(=O)[O-]
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* inchi key:
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** InChIKey=HOBAELRKJCKHQD-QNEBEIHSSA-M
 
* common name:
 
* common name:
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** ca2+-activated_spot-like_protein
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** di-homo-γ-linolenate
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** gtp_pyrophosphokinase
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* molecular weight:
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* ec number:
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** 305.479   
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** [http://enzyme.expasy.org/EC/2.7.6.5 EC-2.7.6.5]
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* Synonym(s):
 
* Synonym(s):
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** (8Z,11Z,14Z)-eicosatrienoic acid
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** DGLA
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** (8Z,11Z,14Z)-eicosatri-8,11,14-enoate
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** (8Z,11Z,14Z)-icosatrienoate
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** di-homo-γ-linolenic acid
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** (Z,Z,Z)-8,11,14-eicosatrienoic acid
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** (Z,Z,Z)-8,11,14-eicosatrienoate
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** (8Z,11Z,14Z)-eicosatrienoate
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** (8Z,11Z,14Z)-icosatrienoic acid
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** (8Z,11Z,14Z)-icosa-8,11,14-trienoate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GTP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[GDP-TP]][c] '''+''' 1 [[AMP]][c]
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* [[RXN-13435]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 GTP[c] '''+''' 1 ATP[c] '''=>''' 1 pppGpp[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6799]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16305]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_7349]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* Wikipedia : Dihomo-gamma-linolenic_acid
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22088 22088]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21158448 21158448]
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** [http://www.genome.jp/dbget-bin/www_bget?R00429 R00429]
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* HMDB : HMDB02925
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9CJ94 Q9CJ94]
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** [http://www.genome.jp/dbget-bin/www_bget?C03242 C03242]
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** [http://www.uniprot.org/uniprot/P44644 P44644]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9PDR3 Q9PDR3]
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** [http://www.chemspider.com/Chemical-Structure.20117973.html 20117973]
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** [http://www.uniprot.org/uniprot/P0AG20 P0AG20]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P52560 P52560]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=71589 71589]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: smiles=CCCCCC=CCC=CCC=CCCCCCCC(=O)[O-]}}
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{{#set: common name=ca2+-activated_spot-like_protein}}
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{{#set: inchi key=InChIKey=HOBAELRKJCKHQD-QNEBEIHSSA-M}}
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{{#set: common name=gtp_pyrophosphokinase}}
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{{#set: common name=di-homo-γ-linolenate}}
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{{#set: ec number=EC-2.7.6.5}}
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{{#set: molecular weight=305.479    }}
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{{#set: gene associated=Tiso_gene_6799|Tiso_gene_16305|Tiso_gene_7349}}
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{{#set: common name=(8Z,11Z,14Z)-eicosatrienoic acid|DGLA|(8Z,11Z,14Z)-eicosatri-8,11,14-enoate|(8Z,11Z,14Z)-icosatrienoate|di-homo-γ-linolenic acid|(Z,Z,Z)-8,11,14-eicosatrienoic acid|(Z,Z,Z)-8,11,14-eicosatrienoate|(8Z,11Z,14Z)-eicosatrienoate|(8Z,11Z,14Z)-icosatrienoic acid|(8Z,11Z,14Z)-icosa-8,11,14-trienoate}}
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{{#set: in pathway=PPGPPMET-PWY}}
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{{#set: produced by=RXN-13435}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:59, 18 March 2018

Metabolite CPD-8120

  • smiles:
    • CCCCCC=CCC=CCC=CCCCCCCC(=O)[O-]
  • inchi key:
    • InChIKey=HOBAELRKJCKHQD-QNEBEIHSSA-M
  • common name:
    • di-homo-γ-linolenate
  • molecular weight:
    • 305.479
  • Synonym(s):
    • (8Z,11Z,14Z)-eicosatrienoic acid
    • DGLA
    • (8Z,11Z,14Z)-eicosatri-8,11,14-enoate
    • (8Z,11Z,14Z)-icosatrienoate
    • di-homo-γ-linolenic acid
    • (Z,Z,Z)-8,11,14-eicosatrienoic acid
    • (Z,Z,Z)-8,11,14-eicosatrienoate
    • (8Z,11Z,14Z)-eicosatrienoate
    • (8Z,11Z,14Z)-icosatrienoic acid
    • (8Z,11Z,14Z)-icosa-8,11,14-trienoate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCC=CCC=CCC=CCCCCCCC(=O)[O-" cannot be used as a page name in this wiki.



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