Difference between revisions of "Tiso gene 5173"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14986 RXN-14986] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-isopropylmalate dehydroge...")
(Created page with "Category:Gene == Gene Tiso_gene_4685 == * left end position: ** 2619 * transcription direction: ** POSITIVE * right end position: ** 8084 * centisome position: ** 18.03346...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14986 RXN-14986] ==
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== Gene Tiso_gene_4685 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2619
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* common name:
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* transcription direction:
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** 3-isopropylmalate dehydrogenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.1.1.85 EC-1.1.1.85]
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** 8084
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* centisome position:
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** 18.033464   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[6.3.4.16-RXN]]
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** 1 [[CPD-1130]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-3618]][c]
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** [[pantograph]]-[[esiliculosus]]
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* With common name(s):
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* [[CARBPSYN-RXN]]
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** 1 3-ethylmalate[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 CO2[c] '''+''' 1 2-oxovalerate[c]
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** experimental_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GLUTAMIN-RXN]]
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* [[Tiso_gene_2920]]
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** experimental_annotation
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** EXPERIMENTAL_ANNOTATION
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***automated-name-match
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-13202]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[RXN-14196]]
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* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
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** in-silico_annotation
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** '''4''' reactions found over '''8''' reactions in the full pathway
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***ec-number
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== Reconstruction information  ==
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** experimental_annotation
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* [[orthology]]:
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***ec-number
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** [[pantograph]]:
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* [[RXN-16909]]
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*** [[esiliculosus]]
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** in-silico_annotation
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* [[annotation]]:
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***ec-number
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** [[pathwaytools]]:
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** experimental_annotation
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*** [[experimental_annotation]]
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***ec-number
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* [[RXN-16910]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-4984]]
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* [[GLUTAMINDEG-PWY]]
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* [[ARGSYN-PWY]]
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* [[PWY-5154]]
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* [[PWY-7790]]
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* [[ARGSYNBSUB-PWY]]
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* [[PWY-7693]]
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* [[PWY-7400]]
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* [[PWY-7791]]
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* [[PWY-5686]]
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* [[CITRULBIO-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=2619}}
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{{#set: common name=3-isopropylmalate dehydrogenase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.1.1.85}}
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{{#set: right end position=8084}}
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{{#set: gene associated=Tiso_gene_2920}}
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{{#set: centisome position=18.033464    }}
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{{#set: in pathway=PWY-7396}}
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{{#set: reaction associated=6.3.4.16-RXN|CARBPSYN-RXN|GLUTAMIN-RXN|RXN-13202|RXN-14196|RXN-16909|RXN-16910}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-4984|GLUTAMINDEG-PWY|ARGSYN-PWY|PWY-5154|PWY-7790|ARGSYNBSUB-PWY|PWY-7693|PWY-7400|PWY-7791|PWY-5686|CITRULBIO-PWY}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Revision as of 00:02, 19 March 2018

Gene Tiso_gene_4685

  • left end position:
    • 2619
  • transcription direction:
    • POSITIVE
  • right end position:
    • 8084
  • centisome position:
    • 18.033464
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5173&oldid=28383"