Difference between revisions of "PWY-699"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_20168 == * left end position: ** 76 * transcription direction: ** POSITIVE * right end position: ** 1694 * centisome position: ** 4.481132...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9634 RXN-9634] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * ec numb...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9634 RXN-9634] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** polyketide_synthase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86] |
| − | + | ** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59] | |
| − | ** 4. | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[1 | + | * With identifiers: |
| − | ** | + | ** 1 [[R-3-hydroxystearoyl-ACPs]][c] '''=>''' 1 [[Octadec-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c] |
| − | *** | + | * With common name(s): |
| − | * [[ | + | ** 1 a (3R)-3-hydroxystearoyl-[acp][c] '''=>''' 1 a trans-octadec-2-enoyl-[acp][c] '''+''' 1 H2O[c] |
| − | ** [[ | + | |
| − | * [[ | + | == Genes associated with this reaction == |
| − | ** | + | Genes have been associated with this reaction based on different elements listed below. |
| − | *** | + | * [[Tiso_gene_135]] |
| − | + | ** IN-SILICO_ANNOTATION | |
| − | ** [[ | + | ***EC-NUMBER |
| − | == | + | * [[Tiso_gene_6884]] |
| − | * [[ | + | ** EXPERIMENTAL_ANNOTATION |
| − | * [[ | + | ***AUTOMATED-NAME-MATCH |
| + | * [[Tiso_gene_10876]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | * [[Tiso_gene_136]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | * [[Tiso_gene_500]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | * [[Tiso_gene_13394]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-5989]], stearate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989] | ||
| + | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * [[manual]]: | ||
| + | ** [[primary_network]] | ||
| + | * [[annotation]]: | ||
| + | ** [[pathwaytools]]: | ||
| + | *** [[experimental_annotation]] | ||
| + | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=polyketide_synthase}} |
| − | {{#set: | + | {{#set: ec number=EC-2.3.1.86}} |
| − | {{#set: | + | {{#set: ec number=EC-4.2.1.59}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_135|Tiso_gene_6884|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_500|Tiso_gene_13394}} |
| − | {{#set: pathway | + | {{#set: in pathway=PWY-5989|PWY3O-355}} |
| + | {{#set: reconstruction category=manual}} | ||
| + | {{#set: reconstruction source=primary_network}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
| + | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}} | ||
Revision as of 17:01, 10 January 2018
Contents
Reaction RXN-9634
- direction:
- LEFT-TO-RIGHT
- common name:
- polyketide_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 R-3-hydroxystearoyl-ACPs[c] => 1 Octadec-2-enoyl-ACPs[c] + 1 WATER[c]
- With common name(s):
- 1 a (3R)-3-hydroxystearoyl-[acp][c] => 1 a trans-octadec-2-enoyl-[acp][c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_135
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_6884
- EXPERIMENTAL_ANNOTATION
- AUTOMATED-NAME-MATCH
- EXPERIMENTAL_ANNOTATION
- Tiso_gene_10876
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_136
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_500
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_13394
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY-5989, stearate biosynthesis II (bacteria and plants): PWY-5989
- 5 reactions found over 6 reactions in the full pathway
- PWY3O-355, stearate biosynthesis III (fungi): PWY3O-355
- 6 reactions found over 6 reactions in the full pathway
