Difference between revisions of "RXN66-521"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12583 RXN-12583] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate:thiamin diphosphat...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12861 RXN-12861] == * direction: ** LEFT-TO-RIGHT * common name: ** dehydroascorbate hydrolase...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12583 RXN-12583] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12861 RXN-12861] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
+
** dehydroascorbate hydrolase
−
** pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial
+
−
** dihydrolipoamide_acetyltransferase
+
−
** ORF
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PYRUVATE]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c]
+
** 1 [[CPD-13907]][c] '''=>''' 1 [[CPD-334]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 pyruvate[c] '''+''' 1 thiamine diphosphate[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 2-(α-hydroxyethyl)thiamine diphosphate[c]
+
** 1 dehydroascorbate (bicyclic form)[c] '''=>''' 1 2,3-dioxo-L-gulonate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_7519]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_2693]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_11362]]
 
−
** [[pantograph]]-[[athaliana]]
 
−
* [[Tiso_gene_2515]]
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_17539]]
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_6983]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6959]], L-ascorbate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6959 PWY-6959]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6961]], L-ascorbate degradation II (bacterial, aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6961 PWY-6961]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00014 R00014]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)}}
+
{{#set: common name=dehydroascorbate hydrolase}}
−
{{#set: common name=pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial}}
+
{{#set: in pathway=PWY-6959|PWY-6961}}
−
{{#set: common name=dihydrolipoamide_acetyltransferase}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: gene associated=Tiso_gene_7519|Tiso_gene_2693|Tiso_gene_11362|Tiso_gene_2515|Tiso_gene_17539|Tiso_gene_6983}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 01:03, 19 March 2018

Reaction RXN-12861

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dehydroascorbate hydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dehydroascorbate (bicyclic form)[c] => 1 2,3-dioxo-L-gulonate[c] + 1 H+[c]

Genes associated with this reaction

Pathways

  • PWY-6959, L-ascorbate degradation V: PWY-6959
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6961, L-ascorbate degradation II (bacterial, aerobic): PWY-6961
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN66-521&oldid=28506"