Difference between revisions of "PWY-6993"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5951 PWY-5951] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] == * direction: ** REVERSIBLE * common name: ** geranylgeranyl_diphosphate_reduc...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5951 PWY-5951] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
** REVERSIBLE
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
** (R,R)-butanediol biosynthesis
+
** geranylgeranyl_diphosphate_reductase
 
* Synonym(s):
 
* Synonym(s):
** (R,R)-butylene glycol fermentation
 
** (R,R)-butanediol fermentation
 
  
== Reaction(s) found ==
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== Reaction Formula ==
* '''1''' reaction(s) found
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* With identifiers:
** [[RR-BUTANEDIOL-DEHYDROGENASE-RXN]]
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** 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7003]][c]
== Reaction(s) not found ==
+
* With common name(s):
* '''0''' reaction(s) not found
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** 1 phytyl diphosphate[c] '''+''' 1 NADP+[c] '''<=>''' 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 tetrahydrogeranylgeranyl diphosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_2613]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08756 R08756]
{{#set: common name=(R,R)-butanediol biosynthesis}}
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{{#set: direction=REVERSIBLE}}
{{#set: common name=(R,R)-butylene glycol fermentation|(R,R)-butanediol fermentation}}
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{{#set: common name=geranylgeranyl_diphosphate_reductase}}
{{#set: reaction found=1}}
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{{#set: gene associated=Tiso_gene_2613}}
{{#set: reaction not found=0}}
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{{#set: in pathway=PWY-5063}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:01, 10 January 2018

Reaction RXN-7660

  • direction:
    • REVERSIBLE
  • common name:
    • geranylgeranyl_diphosphate_reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 phytyl diphosphate[c] + 1 NADP+[c] <=> 1 NADPH[c] + 1 H+[c] + 1 tetrahydrogeranylgeranyl diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_2613
    • IN-SILICO_ANNOTATION
      • AUTOMATED-NAME-MATCH
    • EXPERIMENTAL_ANNOTATION
      • AUTOMATED-NAME-MATCH

Pathways

  • PWY-5063, phytyl diphosphate biosynthesis: PWY-5063
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links