Difference between revisions of "RXN1G-138"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXKIN-RXN PYRIDOXKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxal_kinase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_Pi TransportSeed_Pi] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Form...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXKIN-RXN PYRIDOXKIN-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_Pi TransportSeed_Pi] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** pyridoxal_kinase
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.7.1.35 EC-2.7.1.35]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[ATP]][c] '''+''' 1 [[PYRIDOXAL]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[ADP]][c]
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** 1.0 [[Pi]][e] '''=>''' 1.0 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1 ATP[c] '''+''' 1 pyridoxal[c] '''=>''' 1 H+[c] '''+''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 ADP[c]
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** 1.0 phosphate[e] '''=>''' 1.0 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_6106]]
 
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
*** [[creinhardtii]]
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*** Comment: [[added to manage seeds from extracellular to cytosol compartment]]
*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10224 10224]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00174 R00174]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q7M2L1 Q7M2L1]
 
** [http://www.uniprot.org/uniprot/P44690 P44690]
 
** [http://www.uniprot.org/uniprot/P77150 P77150]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=pyridoxal_kinase}}
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{{#set: in pathway=}}
{{#set: ec number=EC-2.7.1.35}}
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{{#set: reconstruction category=manual}}
{{#set: gene associated=Tiso_gene_6106}}
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{{#set: reconstruction source=manual-import_from_medium}}
{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY}}
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 00:04, 19 March 2018

Reaction TransportSeed_Pi

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 Pi[e] => 1.0 Pi[c]
  • With common name(s):
    • 1.0 phosphate[e] => 1.0 phosphate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links