Difference between revisions of "N-Hydroxy-Arylamines"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_14849 == * left end position: ** 50 * transcription direction: ** POSITIVE * right end position: ** 4421 * centisome position: ** 0.9274717...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1281 RXN0-1281] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydrouridine synthase **...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_14849 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1281 RXN0-1281] ==
−
* left end position:
+
* direction:
−
** 50
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** dihydrouridine synthase
−
* right end position:
+
** trna-dihydrouridine_synthase
−
** 4421
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
−
** 0.92747176   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[3.2.1.55-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[PROTON]][c] '''+''' 1 [[tRNA-uridines]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[tRNA-Dihydrouridines]][c]
−
***ec-number
+
* With common name(s):
−
== Pathways associated ==
+
** 1 H+[c] '''+''' 1 a uridine in tRNA[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 a 5,6-dihydrouridine in tRNA[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_8242]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_15285]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_5731]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_12147]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_15286]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_15154]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_4505]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_7714]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_15416]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_8241]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_15890]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=50}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=dihydrouridine synthase}}
−
{{#set: right end position=4421}}
+
{{#set: common name=trna-dihydrouridine_synthase}}
−
{{#set: centisome position=0.92747176    }}
+
{{#set: ec number=EC-1.1.1}}
−
{{#set: reaction associated=3.2.1.55-RXN}}
+
{{#set: gene associated=Tiso_gene_8242|Tiso_gene_15285|Tiso_gene_5731|Tiso_gene_12147|Tiso_gene_15286|Tiso_gene_15154|Tiso_gene_4505|Tiso_gene_7714|Tiso_gene_15416|Tiso_gene_8241|Tiso_gene_15890}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 01:05, 19 March 2018

Reaction RXN0-1281

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dihydrouridine synthase
    • trna-dihydrouridine_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=N-Hydroxy-Arylamines&oldid=28665"