Difference between revisions of "GDP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10695 RXN-10695] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_14064 == * left end position: ** 1133 * transcription direction: ** POSITIVE * right end position: ** 5744 * centisome position: ** 19.3015...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10695 RXN-10695] ==
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== Gene Tiso_gene_14064 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1133
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/6.2.1 EC-6.2.1]
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** POSITIVE
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* right end position:
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** 5744
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* centisome position:
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** 19.301533   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-12086]]
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-730]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-11517]][c] '''+''' 1 [[PPI]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate[c] '''=>''' 1 AMP[c] '''+''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA[c] '''+''' 1 diphosphate[c]
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* [[RXN-12579]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[TRIACYLGLYCEROL-LIPASE-RXN]]
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* [[Tiso_gene_12275]]
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** in-silico_annotation
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** [[pantograph]]-[[esiliculosus]]
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***ec-number
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* [[Tiso_gene_14183]]
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== Pathways associated ==
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** [[pantograph]]-[[esiliculosus]]
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* [[LIPAS-PWY]]
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== Pathways  ==
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* [[PWY-6857]]
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1133}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07887 R07887]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5744}}
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{{#set: ec number=EC-6.2.1}}
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{{#set: centisome position=19.301533    }}
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{{#set: gene associated=Tiso_gene_12275|Tiso_gene_14183}}
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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{{#set: in pathway=PWY-735}}
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Revision as of 00:06, 19 March 2018

Gene Tiso_gene_14064

  • left end position:
    • 1133
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5744
  • centisome position:
    • 19.301533
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GDP&oldid=28713"