Difference between revisions of "Keratan-sulfate-NAcGlc"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9025 RXN-9025] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phosphorylase * ec...")
(Created page with "Category:Gene == Gene Tiso_gene_6657 == * left end position: ** 42 * transcription direction: ** POSITIVE * right end position: ** 3029 * centisome position: ** 0.3515527...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9025 RXN-9025] ==
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== Gene Tiso_gene_6657 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 42
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* common name:
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* transcription direction:
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** thymidine_phosphorylase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
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** 3029
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* centisome position:
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** 0.3515527   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GLUTAMIN-RXN]]
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** 1 [[CPD0-1027]][c] '''+''' n [[Pi]][c] '''=>''' n [[GLC-1-P]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 a debranched α-limit dextrin[c] '''+''' n phosphate[c] '''=>''' n α-D-glucopyranose 1-phosphate[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GMP-SYN-GLUT-RXN]]
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* [[Tiso_gene_1011]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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** experimental_annotation
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== Pathways  ==
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***ec-number
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* [[PWY-5941]], glycogen degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5941 PWY-5941]
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** [[pantograph]]-[[athaliana]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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** [[pantograph]]-[[synechocystis]]
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* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
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** [[pantograph]]-[[esiliculosus]]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[GMP-SYN-NH3-RXN]]
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== Reconstruction information  ==
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** in-silico_annotation
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* [[annotation]]:
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***ec-number
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** [[pathwaytools]]:
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** experimental_annotation
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*** [[in-silico_annotation]]
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***ec-number
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways associated ==
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* [[PWY-7221]]
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* [[GLUTAMINDEG-PWY]]
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* [[CITRULBIO-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=42}}
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{{#set: common name=thymidine_phosphorylase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.4.1.1}}
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{{#set: right end position=3029}}
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{{#set: gene associated=Tiso_gene_1011}}
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{{#set: centisome position=0.3515527    }}
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{{#set: in pathway=PWY-5941|GLYCOCAT-PWY}}
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{{#set: reaction associated=GLUTAMIN-RXN|GMP-SYN-GLUT-RXN|GMP-SYN-NH3-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-7221|GLUTAMINDEG-PWY|CITRULBIO-PWY}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 00:06, 19 March 2018

Gene Tiso_gene_6657

  • left end position:
    • 42
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3029
  • centisome position:
    • 0.3515527
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Keratan-sulfate-NAcGlc&oldid=28725"